30076.m004682 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30076.m004682 T283867_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.728 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30076.m004682 Myb 14 61
30076.m004682 Myb 67 91

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.763
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.735
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.735
29889.m003258 Ricinus communis 29889.m003258 I 0.732
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.728
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.727
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.710
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.710
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.701
BGIOSGA003347 Oryza indica BGIOSGA003347 I 0.694
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.691
mgf024704m Mimulus guttatus mgf024704m N 0.672