cassava17368.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava17368.m1 T284029_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava17368.m1 Myb 10 57
cassava17368.m1 Myb 64 108

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008784 Ricinus communis 30174.m008784 N 0.861
MDP0000237596 Malus domestica MDP0000237596 N 0.861
MDP0000319634 Malus domestica MDP0000319634 N 0.861
cassava19913.m1 Manihot esculenta cassava19913.m1 N 0.859
TCM_005653 Theobroma cacao TCM_005653 N 0.844
Pm017596 Prunus mume Pm017596 N 0.844
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N 0.844
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N 0.820
DUO1 Vitis vinifera VIT_15s0021g02040 N 0.820
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N 0.820
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N 0.820
GLYMA03G26830 Glycine max GLYMA03G26830 N 0.817
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N 0.815
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N 0.815
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N 0.814
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N 0.814
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N 0.810
GLYMA07G14480 Glycine max GLYMA07G14480 N 0.808
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N 0.803
mgf019330m Mimulus guttatus mgf019330m N 0.803
MTR_8g006470 Medicago truncatula MTR_8g006470 N 0.799
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N 0.799
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N 0.796
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N 0.796
MTR_4g029540 Medicago truncatula MTR_4g029540 N 0.792
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N 0.791
Pm019530 Prunus mume Pm019530 N 0.791
Pm031387 Prunus mume Pm031387 N 0.791
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N 0.791
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N 0.789
POPTR_0014s05370 Populus trichocarpa POPTR_0014s05370 N 0.784
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N 0.784
Si012032m.g Setaria italica Si012032m.g N 0.784
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N 0.784
Carubv10019483m.g Capsella rubella Carubv10019483m.g N 0.784
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N 0.784
Cla006831 Citrullus lanatus Cla006831 N 0.777
Pavir.J30013 Panicum virgatum Pavir.J30013 N 0.776
Pavir.J35399 Panicum virgatum Pavir.J35399 N 0.776
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N 0.773
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N 0.773
Bo8g095200 Brassica oleracea Bo8g095200 N 0.771
Bra007536 Brassica rapa Bra007536 N 0.771
Ca_19557 Cicer arietinum Ca_19557 N 0.769
BGIOSGA016880 Oryza indica BGIOSGA016880 N 0.768
GRMZM2G105137 Zea mays GRMZM2G105137 N 0.768
OB04G27810 Oryza brachyantha OB04G27810 N 0.768
OBART04G20790 Oryza barthii OBART04G20790 N 0.768
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N 0.768
OMERI04G17240 Oryza meridionalis OMERI04G17240 N 0.768
ONIVA04G19030 Oryza nivara ONIVA04G19030 N 0.768
OPUNC04G18480 Oryza punctata OPUNC04G18480 N 0.768
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N 0.768
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N 0.768
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N 0.767
Cucsa.121070 Cucumis sativus Cucsa.121070 N 0.764
Ca_18954 Cicer arietinum Ca_18954 N 0.763
DUO1 Arabidopsis thaliana AT3G60460 N 0.760
Bra003413 Brassica rapa Bra003413 N 0.760
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N 0.760
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N 0.760
Bo6g077030 Brassica oleracea Bo6g077030 N 0.751
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N 0.751
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N 0.746
Si015815m.g Setaria italica Si015815m.g N 0.745
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N 0.744
Thhalv10006475m.g Eutrema salsugineum Thhalv10006475m.g N 0.744
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N 0.743
Sb06g024510 Sorghum bicolor Sb06g024510 N 0.740
TCM_014872 Theobroma cacao TCM_014872 N 0.740
Sb07g027160 Sorghum bicolor Sb07g027160 N 0.731
GRMZM2G311059 Zea mays GRMZM2G311059 N 0.730
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N 0.730
Cla010897 Citrullus lanatus Cla010897 N 0.728
GLYMA09G00371 Glycine max GLYMA09G00371 N 0.719
GLYMA12G37026 Glycine max GLYMA12G37026 N 0.716
GRMZM2G046443 Zea mays GRMZM2G046443 N 0.714
Lus10009780.g Linum usitatissimum Lus10009780.g N 0.713
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N 0.707
Cucsa.094180 Cucumis sativus Cucsa.094180 N 0.704
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N 0.691
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N 0.678
gw1.114.172.1 Physcomitrella patens gw1.114.172.1 N 0.672
gw1.16.238.1 Physcomitrella patens gw1.16.238.1 N 0.672
mgf004314m Mimulus guttatus mgf004314m N 0.670