cassava19706.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava19706.m1 T284055_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.710 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.710 0.849
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.708 0.763
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.708 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19706.m1 Myb 180 226
cassava19706.m1 Myb 232 277

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010576 Ailuropoda melanoleuca ENSAMEG00000010576 I
ENSBTAP00000007323-D1 Bos grunniens ENSBTAP00000007323-D1 I
ZNF205 Bos taurus ENSBTAG00000005572 I
ZNF205 Callithrix jacchus ENSCJAG00000015546 I
ZNF205 Canis familiaris ENSCAFG00000023869 I
ENSCSAG00000010150 Chlorocebus sabaeus ENSCSAG00000010150 I
ZNF205 Dasypus novemcinctus ENSDNOG00000037994 I
ENSETEG00000002476 Echinops telfairi ENSETEG00000002476 I
ZNF205 Equus caballus ENSECAG00000009869 I
ZNF205 Erinaceus europaeus ENSEEUG00000010049 I
ZNF205 Felis catus ENSFCAG00000026028 I
ZNF205 Gorilla gorilla ENSGGOG00000012036 I
ZNF205 Homo sapiens ENSG00000122386 D
ENSSTOG00000003803 Ictidomys tridecemlineatus ENSSTOG00000003803 I
ZNF205 Loxodonta africana ENSLAFG00000021564 I
ENSP00000219091 Macaca fascicularis ENSP00000219091 I
ZNF205 Macaca mulatta ENSMMUG00000009487 I
ENSMEUG00000004328 Macropus eugenii ENSMEUG00000004328 I
ZNF205 Microcebus murinus ENSMICG00000009089 I
ENSMPUG00000015184 Mustela putorius furo ENSMPUG00000015184 I
Zfp13 Mus musculus ENSMUSG00000062012 I
Myotis_brandtii_ZNF205_10028065 Myotis brandtii Myotis_brandtii_ZNF205_10028065 I
ENSNLEG00000009600 Nomascus leucogenys ENSNLEG00000009600 I
ZNF205 Ochotona princeps ENSOPRG00000005820 I
ZNF205 Otolemur garnettii ENSOGAG00000003693 I
ENSOARG00000001319 Ovis aries ENSOARG00000001319 I
ZNF205 Pan troglodytes ENSPTRG00000007686 I
ENSPANG00000024398 Papio anubis ENSPANG00000024398 I
ENSPPYG00000007034 Pongo abelii ENSPPYG00000007034 I
ZNF205 Pteropus vampyrus ENSPVAG00000001475 I
ZNF205 Sorex araneus ENSSARG00000006551 I
ZNF205 Sus scrofa ENSSSCG00000029375 I