CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava21270.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava21270.m1
T284069_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava21270.m1
Myb
174
224
KVIWTNTLHDLFLQAVSHIGLEKAVPKKILEFMNVPGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava35050.m1
Manihot esculenta
cassava35050.m1
N
0.811
Bo9g175250
Brassica oleracea
Bo9g175250
N
0.796
Bra009284
Brassica rapa
Bra009284
N
0.796
Thhalv10016040m.g
Eutrema salsugineum
Thhalv10016040m.g
N
0.796
Ciclev10006586m.g
Citrus clementina
Ciclev10006586m.g
N
0.789
orange1.1g040406m.g
Citrus sinensis
orange1.1g040406m.g
N
0.789
ARR21
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000557
N
0.787
Bostr.13129s0247
Boechera stricta
Bostr.13129s0247
N
0.787
Carubv10003421m.g
Capsella rubella
Carubv10003421m.g
N
0.787
Carubv10007858m.g
Capsella rubella
Carubv10007858m.g
N
0.779
PRUPE_ppa023185mg
Prunus persica
PRUPE_ppa023185mg
N
0.774
30147.m014309
Ricinus communis
30147.m014309
N
0.774
gene13325-v1.0-hybrid
Fragaria vesca
gene13325-v1.0-hybrid
N
0.774
Carubv10006317m.g
Capsella rubella
Carubv10006317m.g
N
0.767
Bo2g007540
Brassica oleracea
Bo2g007540
N
0.756
Bra028705
Brassica rapa
Bra028705
N
0.756
Ciclev10006834m.g
Citrus clementina
Ciclev10006834m.g
N
0.755
orange1.1g043479m.g
Citrus sinensis
orange1.1g043479m.g
N
0.755
ARR21
Arabidopsis thaliana
AT5G07210
N
0.748
Cla006313
Citrullus lanatus
Cla006313
N
0.745
Cucsa.251000
Cucumis sativus
Cucsa.251000
N
0.745
POPTR_0015s13860
Populus trichocarpa
POPTR_0015s13860
I
0.733
evm.TU.supercontig_107.3
Carica papaya
evm.TU.supercontig_107.3
N
0.733
Cagra.6496s0001
Capsella grandiflora
Cagra.6496s0001
N
0.730
Gorai.008G280500
Gossypium raimondii
Gorai.008G280500
I
0.711
VIT_16s0100g00430
Vitis vinifera
VIT_16s0100g00430
N
0.708
cassava37074.valid.m1
Manihot esculenta
cassava37074.valid.m1
I
0.708
cassava37075.valid.m1
Manihot esculenta
cassava37075.valid.m1
I
0.708
Gorai.001G030600
Gossypium raimondii
Gorai.001G030600
I
0.708
VIT_16s0100g00420
Vitis vinifera
VIT_16s0100g00420
I
0.699
Ca_20899
Cicer arietinum
Ca_20899
I
0.699
Cla007104
Citrullus lanatus
Cla007104
N
0.699
Bra005928
Brassica rapa
Bra005928
N
0.697
TCM_015085
Theobroma cacao
TCM_015085
I
0.696
mgf018042m
Mimulus guttatus
mgf018042m
N
0.696
POPTR_0012s13900
Populus trichocarpa
POPTR_0012s13900
N
0.694
ARR13
Arabidopsis thaliana
AT2G27070
N
0.693
GSMUA_Achr10G23650_001
Musa acuminata
GSMUA_Achr10G23650_001
N
0.687
MTR_7g026400
Medicago truncatula
MTR_7g026400
I
0.687
SapurV1A.0400s0190
Salix purpurea
SapurV1A.0400s0190
N
0.685
MDP0000228719
Malus domestica
MDP0000228719
N
0.680
AMTR_s00057p00108840
Amborella trichopoda
AMTR_s00057p00108840
I
0.671
gene03235-v1.0-hybrid
Fragaria vesca
gene03235-v1.0-hybrid
N
0.666
Thhalv10015296m.g
Eutrema salsugineum
Thhalv10015296m.g
I
0.666
AMTR_s00086p00182350
Amborella trichopoda
AMTR_s00086p00182350
I
0.663
PGSC0003DMG400007823
Solanum tuberosum
PGSC0003DMG400007823
I
0.663
PRUPE_ppa018934mg
Prunus persica
PRUPE_ppa018934mg
I
0.663
Solyc12g010330.1
Solanum lycopersicum
Solyc12g010330.1
I
0.663
Pm027701
Prunus mume
Pm027701
I
0.663
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.663
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.663
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.663
IGS.gm_5_00099
Chlorella NC64A
IGS.gm_5_00099
N
0.662
mgf019327m
Mimulus guttatus
mgf019327m
N
0.662