CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava24345.valid.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava24345.valid.m1
T284101_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.868
0.957
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.868
0.957
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB
VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.868
0.957
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.868
0.957
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.802
0.830
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN
NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.796
0.809
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.796
0.809
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.796
0.809
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.790
0.915
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.790
0.915
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.790
0.915
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.779
0.787
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.779
0.787
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.779
0.830
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS
SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.779
0.830
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.779
0.830
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.779
0.830
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.707
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava24345.valid.m1
Myb
44
95
RLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
800 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m014313
Ricinus communis
30147.m014313
I
30190.m011119
Ricinus communis
30190.m011119
I
30190.m011120
Ricinus communis
30190.m011120
I
60638.m00016
Ricinus communis
60638.m00016
I
AMTR_s00095p00096190
Amborella trichopoda
AMTR_s00095p00096190
I
Aquca_012_00144
Aquilegia coerulea
Aquca_012_00144
I
Aquca_013_00434
Aquilegia coerulea
Aquca_013_00434
I
Aquca_013_00435
Aquilegia coerulea
Aquca_013_00435
I
Aquca_013_00436
Aquilegia coerulea
Aquca_013_00436
I
Aquca_122_00012
Aquilegia coerulea
Aquca_122_00012
I
Aquca_122_00013
Aquilegia coerulea
Aquca_122_00013
I
DREB1F
Arabidopsis thaliana
AT1G12610
D
DREB1C
Arabidopsis thaliana
AT4G25470
D
DREB1A
Arabidopsis thaliana
AT4G25480
D
DREB1D
Arabidopsis thaliana
AT5G51990
D
DREB1G
Oryza indica
BGIOSGA008804
I
DREB1E
Oryza indica
BGIOSGA016950
I
Bo01335s010
Brassica oleracea
Bo01335s010
I
Bo7g110320
Brassica oleracea
Bo7g110320
I
Bo8g050800
Brassica oleracea
Bo8g050800
I
Bo8g108050
Brassica oleracea
Bo8g108050
I
Bo9g104770
Brassica oleracea
Bo9g104770
I
Bostr.13671s0200
Boechera stricta
Bostr.13671s0200
I
Bostr.15774s0346
Boechera stricta
Bostr.15774s0346
I
Bostr.7867s0359
Boechera stricta
Bostr.7867s0359
I
Bostr.7867s0360
Boechera stricta
Bostr.7867s0360
I
Bostr.7867s0361
Boechera stricta
Bostr.7867s0361
I
Bra010460
Brassica rapa
Bra010460
I
Bra016763
Brassica rapa
Bra016763
I
Bra019162
Brassica rapa
Bra019162
I
Bra022770
Brassica rapa
Bra022770
I
Bra026963
Brassica rapa
Bra026963
I
Bra028290
Brassica rapa
Bra028290
I
BRADI3G51630
Brachypodium distachyon
BRADI3G51630
I
Cagra.0094s0011
Capsella grandiflora
Cagra.0094s0011
I
Cagra.0568s0171
Capsella grandiflora
Cagra.0568s0171
I
Cagra.2248s0026
Capsella grandiflora
Cagra.2248s0026
I
Cagra.28753s0001
Capsella grandiflora
Cagra.28753s0001
I
Carubv10005709m.g
Capsella rubella
Carubv10005709m.g
I
Carubv10006965m.g
Capsella rubella
Carubv10006965m.g
I
Carubv10010303m.g
Capsella rubella
Carubv10010303m.g
I
Carubv10027759m.g
Capsella rubella
Carubv10027759m.g
I
cassava17064.m1
Manihot esculenta
cassava17064.m1
I
cassava18935.valid.m1
Manihot esculenta
cassava18935.valid.m1
I
cassava35062.m1
Manihot esculenta
cassava35062.m1
I
cassava41192.m1
Manihot esculenta
cassava41192.m1
I
cassava41218.m1
Manihot esculenta
cassava41218.m1
I
Ca_04504
Cicer arietinum
Ca_04504
I
Ca_18948
Cicer arietinum
Ca_18948
I
chr2.CM0304.640.nd
Lotus japonicus
chr2.CM0304.640.nd
I
chr3.LjT42M03.60.nd
Lotus japonicus
chr3.LjT42M03.60.nd
I
Ciclev10007068m.g
Citrus clementina
Ciclev10007068m.g
I
Ciclev10021923m.g
Citrus clementina
Ciclev10021923m.g
I
Cla002362
Citrullus lanatus
Cla002362
I
Cla006315
Citrullus lanatus
Cla006315
I
Cla011674
Citrullus lanatus
Cla011674
I
Cucsa.166340
Cucumis sativus
Cucsa.166340
I
Cucsa.251030
Cucumis sativus
Cucsa.251030
I
Cucsa.302750
Cucumis sativus
Cucsa.302750
I
Eucgr.A02818
Eucalyptus grandis
Eucgr.A02818
I
Eucgr.A02820
Eucalyptus grandis
Eucgr.A02820
I
Eucgr.A02821
Eucalyptus grandis
Eucgr.A02821
I
Eucgr.A02822
Eucalyptus grandis
Eucgr.A02822
I
Eucgr.A02824
Eucalyptus grandis
Eucgr.A02824
I
Eucgr.A02825
Eucalyptus grandis
Eucgr.A02825
I
Eucgr.A02826
Eucalyptus grandis
Eucgr.A02826
I
Eucgr.A02827
Eucalyptus grandis
Eucgr.A02827
I
Eucgr.A02830
Eucalyptus grandis
Eucgr.A02830
I
Eucgr.A02831
Eucalyptus grandis
Eucgr.A02831
I
Eucgr.A02832
Eucalyptus grandis
Eucgr.A02832
I
Eucgr.A02834
Eucalyptus grandis
Eucgr.A02834
I
Eucgr.D01925
Eucalyptus grandis
Eucgr.D01925
I
Eucgr.E00529
Eucalyptus grandis
Eucgr.E00529
I
evm.TU.supercontig_5.66
Carica papaya
evm.TU.supercontig_5.66
I
evm.TU.supercontig_74.84
Carica papaya
evm.TU.supercontig_74.84
I
DDF1
Arabidopsis lyrata
fgenesh2_kg.1__1363__AT1G12610.1
D
CBF2
Arabidopsis lyrata
fgenesh2_kg.7__1712__AT4G25470.1
I
gene13329-v1.0-hybrid
Fragaria vesca
gene13329-v1.0-hybrid
I
gene32378-v1.0-hybrid
Fragaria vesca
gene32378-v1.0-hybrid
I
GLYMA09G27180
Glycine max
GLYMA09G27180
I
GLYMA10G38440
Glycine max
GLYMA10G38440
I
GLYMA11G19341
Glycine max
GLYMA11G19341
I
GLYMA12G09130
Glycine max
GLYMA12G09130
I
GLYMA12G30740
Glycine max
GLYMA12G30740
I
GLYMA13G39540
Glycine max
GLYMA13G39540
I
GLYMA20G29410
Glycine max
GLYMA20G29410
I
Gorai.006G046200
Gossypium raimondii
Gorai.006G046200
I
Gorai.007G010100
Gossypium raimondii
Gorai.007G010100
I
Gorai.008G243600
Gossypium raimondii
Gorai.008G243600
I
GRMZM2G137341
Zea mays
GRMZM2G137341
I
GSMUA_Achr11G21630_001
Musa acuminata
GSMUA_Achr11G21630_001
I
GSMUA_Achr4G19660_001
Musa acuminata
GSMUA_Achr4G19660_001
I
GSMUA_Achr8G11980_001
Musa acuminata
GSMUA_Achr8G11980_001
I
LjSGA_037211.1
Lotus japonicus
LjSGA_037211.1
I
LPERR02G22610
Leersia perrieri
LPERR02G22610
I
LPERR04G18190
Leersia perrieri
LPERR04G18190
I
Lus10001871.g
Linum usitatissimum
Lus10001871.g
I
Lus10006332.g
Linum usitatissimum
Lus10006332.g
I
Lus10006334.g
Linum usitatissimum
Lus10006334.g
I
Lus10019455.g
Linum usitatissimum
Lus10019455.g
I
Lus10027412.g
Linum usitatissimum
Lus10027412.g
I
Lus10029601.g
Linum usitatissimum
Lus10029601.g
I
Lus10029602.g
Linum usitatissimum
Lus10029602.g
I
Lus10031657.g
Linum usitatissimum
Lus10031657.g
I
MDP0000154764
Malus domestica
MDP0000154764
I
MDP0000198054
Malus domestica
MDP0000198054
I
mgf016974m
Mimulus guttatus
mgf016974m
I
mgf017136m
Mimulus guttatus
mgf017136m
I
mgf018631m
Mimulus guttatus
mgf018631m
I
mgf018934m
Mimulus guttatus
mgf018934m
I
mgf019061m
Mimulus guttatus
mgf019061m
I
mgf022408m
Mimulus guttatus
mgf022408m
I
mgf026339m
Mimulus guttatus
mgf026339m
I
mgf026642m
Mimulus guttatus
mgf026642m
I
MLOC_75886
Hordeum vulgare
MLOC_75886
I
MTR_1g101600
Medicago truncatula
MTR_1g101600
I
MTR_2g085015
Medicago truncatula
MTR_2g085015
I
MTR_6g465420
Medicago truncatula
MTR_6g465420
I
MTR_6g465430
Medicago truncatula
MTR_6g465430
I
MTR_6g465450
Medicago truncatula
MTR_6g465450
I
MTR_6g465460
Medicago truncatula
MTR_6g465460
I
MTR_6g465510
Medicago truncatula
MTR_6g465510
I
MTR_6g465530
Medicago truncatula
MTR_6g465530
I
MTR_6g465690
Medicago truncatula
MTR_6g465690
I
MTR_6g465850
Medicago truncatula
MTR_6g465850
I
MTR_6g466000
Medicago truncatula
MTR_6g466000
I
MTR_6g466130
Medicago truncatula
MTR_6g466130
I
MTR_8g006410
Medicago truncatula
MTR_8g006410
I
OBART02G27760
Oryza barthii
OBART02G27760
I
OBART04G22220
Oryza barthii
OBART04G22220
I
OGLUM02G28340
Oryza glumaepatula
OGLUM02G28340
I
OGLUM04G22260
Oryza glumaepatula
OGLUM04G22260
I
OMERI02G26980
Oryza meridionalis
OMERI02G26980
I
OMERI04G18770
Oryza meridionalis
OMERI04G18770
I
ONIVA02G30790
Oryza nivara
ONIVA02G30790
I
ONIVA04G20840
Oryza nivara
ONIVA04G20840
I
OPUNC02G25480
Oryza punctata
OPUNC02G25480
I
OPUNC04G19970
Oryza punctata
OPUNC04G19970
I
orange1.1g026103m.g
Citrus sinensis
orange1.1g026103m.g
I
orange1.1g028094m.g
Citrus sinensis
orange1.1g028094m.g
I
orange1.1g029015m.g
Citrus sinensis
orange1.1g029015m.g
I
ORGLA04G0192900
Oryza glaberrima
ORGLA04G0192900
I
ORUFI02G29230
Oryza rufipogon
ORUFI02G29230
I
ORUFI04G23890
Oryza rufipogon
ORUFI04G23890
I
DREB1G
Oryza sativa
OS02G0677300
D
DREB1E
Oryza sativa
OS04G0572400
D
Pavir.Aa00912
Panicum virgatum
Pavir.Aa00912
I
Pavir.Ab02685
Panicum virgatum
Pavir.Ab02685
I
PGSC0003DMG400004255
Solanum tuberosum
PGSC0003DMG400004255
I
PGSC0003DMG400012524
Solanum tuberosum
PGSC0003DMG400012524
I
PGSC0003DMG400012525
Solanum tuberosum
PGSC0003DMG400012525
I
PGSC0003DMG400014309
Solanum tuberosum
PGSC0003DMG400014309
I
PGSC0003DMG400014311
Solanum tuberosum
PGSC0003DMG400014311
I
PK23332.1
Cannabis sativa
PK23332.1
I
Pm019386
Prunus mume
Pm019386
I
Pm023769
Prunus mume
Pm023769
I
Pm023772
Prunus mume
Pm023772
I
Pm023775
Prunus mume
Pm023775
I
POPTR_0001s08710
Populus trichocarpa
POPTR_0001s08710
I
POPTR_0001s08720
Populus trichocarpa
POPTR_0001s08720
I
POPTR_0004s19820
Populus trichocarpa
POPTR_0004s19820
I
POPTR_0009s14990
Populus trichocarpa
POPTR_0009s14990
I
POPTR_0012s13870
Populus trichocarpa
POPTR_0012s13870
I
POPTR_0014s05500
Populus trichocarpa
POPTR_0014s05500
I
POPTR_0015s13830
Populus trichocarpa
POPTR_0015s13830
I
PRUPE_ppa010800mg
Prunus persica
PRUPE_ppa010800mg
I
PRUPE_ppa010909mg
Prunus persica
PRUPE_ppa010909mg
I
PRUPE_ppa010935mg
Prunus persica
PRUPE_ppa010935mg
I
PRUPE_ppa017761mg
Prunus persica
PRUPE_ppa017761mg
I
PRUPE_ppa021197mg
Prunus persica
PRUPE_ppa021197mg
I
Q6T3U0_BRANA
Brassica napus
Q6T3U0_BRANA
D
Q8S2T3_BRANA
Brassica napus
Q8S2T3_BRANA
D
SapurV1A.0045s0710
Salix purpurea
SapurV1A.0045s0710
I
SapurV1A.0068s0560
Salix purpurea
SapurV1A.0068s0560
I
SapurV1A.0219s0320
Salix purpurea
SapurV1A.0219s0320
I
SapurV1A.0282s0070
Salix purpurea
SapurV1A.0282s0070
I
SapurV1A.0282s0080
Salix purpurea
SapurV1A.0282s0080
I
SapurV1A.0400s0160
Salix purpurea
SapurV1A.0400s0160
I
SapurV1A.0490s0260
Salix purpurea
SapurV1A.0490s0260
I
Sb04g031950
Sorghum bicolor
Sb04g031950
I
CBF4
Arabidopsis lyrata
scaffold_801637.1
I
Si018262m.g
Setaria italica
Si018262m.g
I
Solyc03g026270.1
Solanum lycopersicum
Solyc03g026270.1
I
Solyc03g026280.2
Solanum lycopersicum
Solyc03g026280.2
I
Solyc03g124110.1
Solanum lycopersicum
Solyc03g124110.1
I
Solyc08g007820.1
Solanum lycopersicum
Solyc08g007820.1
I
TCM_016175
Theobroma cacao
TCM_016175
I
Thhalv10009978m.g
Eutrema salsugineum
Thhalv10009978m.g
I
Thhalv10015252m.g
Eutrema salsugineum
Thhalv10015252m.g
I
Thhalv10027405m.g
Eutrema salsugineum
Thhalv10027405m.g
I
VIT_02s0025g04460
Vitis vinifera
VIT_02s0025g04460
I
VIT_06s0061g01400
Vitis vinifera
VIT_06s0061g01400
I
VIT_11s0016g02140
Vitis vinifera
VIT_11s0016g02140
I
VIT_16s0100g00380
Vitis vinifera
VIT_16s0100g00380
I