CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava27189.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava27189.m1
T284140_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.773
0.892
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.680
0.667
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava27189.m1
Myb
28
75
RGPWTPEEDELLSSYVKKEGTGRWRTLPSRAGLLRCGKSCRLRWMNYL
cassava27189.m1
Myb
81
126
RGRIAPDEEDIILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATMYB121
Arabidopsis thaliana
AT3G30210
D
0.680
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.773
AMTR_s00024p00250970
Amborella trichopoda
AMTR_s00024p00250970
I
0.693
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.707
AMTR_s00068p00092800
Amborella trichopoda
AMTR_s00068p00092800
I
0.750
AMTR_s00068p00097220
Amborella trichopoda
AMTR_s00068p00097220
I
0.750
AMTR_s00068p00099460
Amborella trichopoda
AMTR_s00068p00099460
I
0.740
AMTR_s00068p00118480
Amborella trichopoda
AMTR_s00068p00118480
I
0.718
MYB5
Arabidopsis thaliana
AT3G13540
I
0.727
BGIOSGA004260
Oryza indica
BGIOSGA004260
I
0.688
Bo1g138250
Brassica oleracea
Bo1g138250
I
0.738
Bo7g088650
Brassica oleracea
Bo7g088650
I
0.697
Bo9g009020
Brassica oleracea
Bo9g009020
I
0.697
Bra025410
Brassica rapa
Bra025410
I
0.700
Bra027423
Brassica rapa
Bra027423
I
0.727
Bra036202
Brassica rapa
Bra036202
I
0.674
Bra039395
Brassica rapa
Bra039395
I
0.741
BRADI2G47367
Brachypodium distachyon
BRADI2G47367
I
0.684
F775_42516
Aegilops tauschii
F775_42516
I
0.665
ATMYB121
Arabidopsis lyrata
fgenesh2_kg.5__710__AT3G30210.1
I
0.680
GLYMA05G35050
Glycine max
GLYMA05G35050
I
0.661
GLYMA07G05960
Glycine max
GLYMA07G05960
I
0.664
GLYMA08G04670
Glycine max
GLYMA08G04670
I
0.661
GLYMA13G09980
Glycine max
GLYMA13G09980
I
0.782
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.673
GLYMA14G24500
Glycine max
GLYMA14G24500
I
0.782
GLYMA16G02570
Glycine max
GLYMA16G02570
I
0.664
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.673
GLYMA19G44660
Glycine max
GLYMA19G44660
I
0.690
GRMZM2G395672
Zea mays
GRMZM2G395672
I
0.736
GSMUA_Achr10G14030_001
Musa acuminata
GSMUA_Achr10G14030_001
I
0.725
GSMUA_Achr2G04730_001
Musa acuminata
GSMUA_Achr2G04730_001
I
0.686
GSMUA_Achr2G19380_001
Musa acuminata
GSMUA_Achr2G19380_001
I
0.738
GSMUA_Achr3G06470_001
Musa acuminata
GSMUA_Achr3G06470_001
I
0.673
GSMUA_Achr3G27700_001
Musa acuminata
GSMUA_Achr3G27700_001
I
0.673
GSMUA_Achr5G06530_001
Musa acuminata
GSMUA_Achr5G06530_001
I
0.724
GSMUA_Achr6G14840_001
Musa acuminata
GSMUA_Achr6G14840_001
I
0.714
GSMUA_Achr7G13700_001
Musa acuminata
GSMUA_Achr7G13700_001
I
0.706
LPERR01G23630
Leersia perrieri
LPERR01G23630
I
0.685
MTR_3g083540
Medicago truncatula
MTR_3g083540
I
0.768
MTR_7g117730
Medicago truncatula
MTR_7g117730
I
0.673
MTR_8g027345
Medicago truncatula
MTR_8g027345
I
0.662
OLONG_002608
Oryza longistaminata
OLONG_002608
I
0.688
ORGLA01G0227100
Oryza glaberrima
ORGLA01G0227100
I
0.688
ORUFI01G30610
Oryza rufipogon
ORUFI01G30610
I
0.688
OS01G0695900
Oryza sativa
OS01G0695900
I
0.688
PGSC0003DMG400001376
Solanum tuberosum
PGSC0003DMG400001376
I
0.697
POPTR_0001s04240
Populus trichocarpa
POPTR_0001s04240
I
0.780
POPTR_0001s11100
Populus trichocarpa
POPTR_0001s11100
I
0.673
POPTR_0002s17460
Populus trichocarpa
POPTR_0002s17460
I
0.675
POPTR_0003s14420
Populus trichocarpa
POPTR_0003s14420
I
0.673
POPTR_0003s14430
Populus trichocarpa
POPTR_0003s14430
I
0.691
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.797
POPTR_0004s11720
Populus trichocarpa
POPTR_0004s11720
I
0.692
POPTR_0013s05300
Populus trichocarpa
POPTR_0013s05300
I
0.783
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.798
POPTR_0014s09630
Populus trichocarpa
POPTR_0014s09630
I
0.681
POPTR_0017s13370
Populus trichocarpa
POPTR_0017s13370
I
0.689
POPTR_0019s05190
Populus trichocarpa
POPTR_0019s05190
I
0.808
POPTR_0019s05200
Populus trichocarpa
POPTR_0019s05200
I
0.808
POPTR_0019s05210
Populus trichocarpa
POPTR_0019s05210
I
0.808
PRUPE_ppa006730mg
Prunus persica
PRUPE_ppa006730mg
I
0.810
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.703
PRUPE_ppa016385mg
Prunus persica
PRUPE_ppa016385mg
I
0.692
PRUPE_ppa021577mg
Prunus persica
PRUPE_ppa021577mg
I
0.701
Sb06g023620
Sorghum bicolor
Sb06g023620
I
0.664
ATMYB5
Arabidopsis lyrata
scaffold_301556.1
I
0.727
Si004316m.g
Setaria italica
Si004316m.g
I
0.713
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.803
Solyc02g089190.1
Solanum lycopersicum
Solyc02g089190.1
I
0.697
TCM_005112
Theobroma cacao
TCM_005112
I
0.703
TCM_018971
Theobroma cacao
TCM_018971
I
0.694
TCM_024180
Theobroma cacao
TCM_024180
I
0.776
TCM_025910
Theobroma cacao
TCM_025910
I
0.792
VIT_06s0004g00570
Vitis vinifera
VIT_06s0004g00570
I
0.775
VIT_08s0007g07230
Vitis vinifera
VIT_08s0007g07230
I
0.787
ATMYB121
Vitis vinifera
VIT_14s0083g01060
I
0.675
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.670
VIT_16s0050g00070
Vitis vinifera
VIT_16s0050g00070
I
0.682
Ca_01329
Cicer arietinum
Ca_01329
I
0.690
Ca_17627
Cicer arietinum
Ca_17627
I
0.693
Cla016762
Citrullus lanatus
Cla016762
I
0.672
Pm011657
Prunus mume
Pm011657
I
0.701
Pm015309
Prunus mume
Pm015309
I
0.670
Pm015392
Prunus mume
Pm015392
I
0.692
Pm018338
Prunus mume
Pm018338
I
0.703
30068.m002544
Ricinus communis
30068.m002544
I
0.673
cassava25868.m1
Manihot esculenta
cassava25868.m1
I
0.817
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.681
cassava34176.m1
Manihot esculenta
cassava34176.m1
I
0.674
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
0.806
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
0.806
cassava9891.m1
Manihot esculenta
cassava9891.m1
I
0.692
Cucsa.238540
Cucumis sativus
Cucsa.238540
I
0.672
mgf001865m
Mimulus guttatus
mgf001865m
I
0.727
mgf006108m
Mimulus guttatus
mgf006108m
I
0.670
mgf015598m
Mimulus guttatus
mgf015598m
I
0.667
Aquca_009_00493
Aquilegia coerulea
Aquca_009_00493
I
0.769
Aquca_009_00496
Aquilegia coerulea
Aquca_009_00496
I
0.729
Bostr.0556s0619
Boechera stricta
Bostr.0556s0619
I
0.680
Bostr.3640s0147
Boechera stricta
Bostr.3640s0147
I
0.727
Cagra.0690s0007
Capsella grandiflora
Cagra.0690s0007
I
0.716
Cagra.1138s0003
Capsella grandiflora
Cagra.1138s0003
I
0.680
Carubv10014443m.g
Capsella rubella
Carubv10014443m.g
I
0.716
Carubv10018530m.g
Capsella rubella
Carubv10018530m.g
I
0.680
Ciclev10013466m.g
Citrus clementina
Ciclev10013466m.g
I
0.673
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
0.806
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.703
Eucgr.A02110
Eucalyptus grandis
Eucgr.A02110
I
0.757
Eucgr.B03606
Eucalyptus grandis
Eucgr.B03606
I
0.776
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.664
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.703
Eucgr.I02057
Eucalyptus grandis
Eucgr.I02057
I
0.697
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.787
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.797
evm.TU.supercontig_14.220
Carica papaya
evm.TU.supercontig_14.220
I
0.694
evm.TU.supercontig_51.138
Carica papaya
evm.TU.supercontig_51.138
I
0.747
evm.TU.supercontig_51.139
Carica papaya
evm.TU.supercontig_51.139
I
0.692
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.686
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.703
gene25098-v1.0-hybrid
Fragaria vesca
gene25098-v1.0-hybrid
I
0.664
Gorai.001G090100
Gossypium raimondii
Gorai.001G090100
I
0.668
Gorai.001G207500
Gossypium raimondii
Gorai.001G207500
I
0.689
Gorai.003G021100
Gossypium raimondii
Gorai.003G021100
I
0.664
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.672
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.693
Gorai.004G151000
Gossypium raimondii
Gorai.004G151000
I
0.670
Gorai.007G260600
Gossypium raimondii
Gorai.007G260600
I
0.768
Gorai.007G350500
Gossypium raimondii
Gorai.007G350500
I
0.810
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.703
Gorai.013G114900
Gossypium raimondii
Gorai.013G114900
I
0.718
Lus10013762.g
Linum usitatissimum
Lus10013762.g
I
0.696
Lus10039173.g
Linum usitatissimum
Lus10039173.g
I
0.717
MDP0000140609
Malus domestica
MDP0000140609
I
0.664
MDP0000144751
Malus domestica
MDP0000144751
I
0.666
MDP0000157940
Malus domestica
MDP0000157940
I
0.669
MDP0000196982
Malus domestica
MDP0000196982
I
0.739
MDP0000286143
Malus domestica
MDP0000286143
I
0.680
MDP0000655330
Malus domestica
MDP0000655330
I
0.806
MDP0000723614
Malus domestica
MDP0000723614
I
0.806
MDP0000791870
Malus domestica
MDP0000791870
I
0.797
MDP0000887107
Malus domestica
MDP0000887107
I
0.664
MDP0000915330
Malus domestica
MDP0000915330
I
0.703
orange1.1g036215m.g
Citrus sinensis
orange1.1g036215m.g
I
0.693
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
0.806
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.703
orange1.1g047854m.g
Citrus sinensis
orange1.1g047854m.g
I
0.673
Pavir.J31180
Panicum virgatum
Pavir.J31180
I
0.665
SapurV1A.0003s0900
Salix purpurea
SapurV1A.0003s0900
I
0.675
SapurV1A.0013s0160
Salix purpurea
SapurV1A.0013s0160
I
0.681
SapurV1A.0035s0040
Salix purpurea
SapurV1A.0035s0040
I
0.661
SapurV1A.0059s0150
Salix purpurea
SapurV1A.0059s0150
I
0.673
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.691
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.797
SapurV1A.0323s0160
Salix purpurea
SapurV1A.0323s0160
I
0.692
SapurV1A.0553s0090
Salix purpurea
SapurV1A.0553s0090
I
0.675
SapurV1A.0553s0100
Salix purpurea
SapurV1A.0553s0100
I
0.797
SapurV1A.0553s0110
Salix purpurea
SapurV1A.0553s0110
I
0.797
SapurV1A.0598s0010
Salix purpurea
SapurV1A.0598s0010
I
0.782
SapurV1A.0918s0130
Salix purpurea
SapurV1A.0918s0130
I
0.771
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
0.822
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.798
Thhalv10005370m.g
Eutrema salsugineum
Thhalv10005370m.g
I
0.676
Thhalv10022057m.g
Eutrema salsugineum
Thhalv10022057m.g
I
0.727
PK13689.1
Cannabis sativa
PK13689.1
I
0.744
PK14784.1
Cannabis sativa
PK14784.1
I
0.703
PK23594.1
Cannabis sativa
PK23594.1
I
0.673
chr1.CM0105.50.nd
Lotus japonicus
chr1.CM0105.50.nd
I
0.690
LjSGA_023691.1
Lotus japonicus
LjSGA_023691.1
I
0.695
LjT20L14.140.nd
Lotus japonicus
LjT20L14.140.nd
I
0.759
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
0.690