CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava9944.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava9944.m1
T284347_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.664
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava9944.m1
Myb
5
52
KGAWTVEEDRKLADYIEVHGAKRWKTIAFKAGLKRCGKSCRLRWLNYL
cassava9944.m1
Myb
58
103
RGNISDEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_00s0341g00050
Vitis vinifera
VIT_00s0341g00050
N
0.881
cassava33302.m1
Manihot esculenta
cassava33302.m1
I
0.854
TCM_015933
Theobroma cacao
TCM_015933
I
0.852
Pm013277
Prunus mume
Pm013277
N
0.852
Eucgr.F04423
Eucalyptus grandis
Eucgr.F04423
N
0.852
Eucgr.E00407
Eucalyptus grandis
Eucgr.E00407
N
0.850
PRUPE_ppa024533mg
Prunus persica
PRUPE_ppa024533mg
N
0.849
TCM_029126
Theobroma cacao
TCM_029126
N
0.849
PRUPE_ppa016135mg
Prunus persica
PRUPE_ppa016135mg
N
0.843
Pm023419
Prunus mume
Pm023419
N
0.843
gene08880-v1.0-hybrid
Fragaria vesca
gene08880-v1.0-hybrid
N
0.843
VIT_04s0008g01870
Vitis vinifera
VIT_04s0008g01870
I
0.835
Gorai.009G146500
Gossypium raimondii
Gorai.009G146500
N
0.835
Eucgr.F04422
Eucalyptus grandis
Eucgr.F04422
N
0.834
VIT_09s0002g01380
Vitis vinifera
VIT_09s0002g01380
N
0.830
MDP0000226215
Malus domestica
MDP0000226215
N
0.829
MDP0000253904
Malus domestica
MDP0000253904
N
0.829
MDP0000133817
Malus domestica
MDP0000133817
I
0.828
MDP0000143276
Malus domestica
MDP0000143276
I
0.828
Cla012784
Citrullus lanatus
Cla012784
N
0.822
cassava2804.m1
Manihot esculenta
cassava2804.m1
N
0.822
Cucsa.340790
Cucumis sativus
Cucsa.340790
N
0.822
evm.TU.supercontig_25.115
Carica papaya
evm.TU.supercontig_25.115
N
0.820
MDP0000931057
Malus domestica
MDP0000931057
N
0.819
GLYMA17G15270
Glycine max
GLYMA17G15270
I
0.815
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.814
cassava31571.valid.m1
Manihot esculenta
cassava31571.valid.m1
N
0.809
POPTR_0003s07680
Populus trichocarpa
POPTR_0003s07680
N
0.805
SapurV1A.1087s0090
Salix purpurea
SapurV1A.1087s0090
N
0.805
SapurV1A.1360s0110
Salix purpurea
SapurV1A.1360s0110
N
0.805
POPTR_0001s16970
Populus trichocarpa
POPTR_0001s16970
N
0.804
Gorai.004G196800
Gossypium raimondii
Gorai.004G196800
N
0.804
SapurV1A.0002s0910
Salix purpurea
SapurV1A.0002s0910
N
0.803
SapurV1A.0177s0330
Salix purpurea
SapurV1A.0177s0330
N
0.795
SapurV1A.0177s0340
Salix purpurea
SapurV1A.0177s0340
N
0.795
SapurV1A.4052s0010
Salix purpurea
SapurV1A.4052s0010
N
0.795
MDP0000124555
Malus domestica
MDP0000124555
N
0.791
Ciclev10022303m.g
Citrus clementina
Ciclev10022303m.g
N
0.780
orange1.1g028843m.g
Citrus sinensis
orange1.1g028843m.g
N
0.780
gene07418-v1.0-hybrid
Fragaria vesca
gene07418-v1.0-hybrid
N
0.774
Gorai.012G011700
Gossypium raimondii
Gorai.012G011700
N
0.774
GLYMA05G04900
Glycine max
GLYMA05G04900
I
0.771
GLYMA01G41610
Glycine max
GLYMA01G41610
N
0.766
Eucgr.B01869
Eucalyptus grandis
Eucgr.B01869
I
0.766
Eucgr.B01964
Eucalyptus grandis
Eucgr.B01964
I
0.759
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.757
POPTR_0003s06320
Populus trichocarpa
POPTR_0003s06320
N
0.756
Ca_12762
Cicer arietinum
Ca_12762
N
0.755
Eucgr.C00725
Eucalyptus grandis
Eucgr.C00725
I
0.755
TCM_037383
Theobroma cacao
TCM_037383
I
0.752
Gorai.009G040900
Gossypium raimondii
Gorai.009G040900
N
0.748
MTR_4g100720
Medicago truncatula
MTR_4g100720
N
0.746
mgf018735m
Mimulus guttatus
mgf018735m
N
0.745
Gorai.009G040800
Gossypium raimondii
Gorai.009G040800
N
0.744
POPTR_0006s23780
Populus trichocarpa
POPTR_0006s23780
I
0.742
evm.TU.supercontig_46.144
Carica papaya
evm.TU.supercontig_46.144
N
0.742
SapurV1A.0435s0070
Salix purpurea
SapurV1A.0435s0070
N
0.742
SapurV1A.0710s0030
Salix purpurea
SapurV1A.0710s0030
I
0.742
PRUPE_ppa026916mg
Prunus persica
PRUPE_ppa026916mg
I
0.740
Pm005577
Prunus mume
Pm005577
I
0.740
MDP0000261265
Malus domestica
MDP0000261265
I
0.738
Ciclev10009521m.g
Citrus clementina
Ciclev10009521m.g
N
0.737
orange1.1g028922m.g
Citrus sinensis
orange1.1g028922m.g
N
0.737
POPTR_0018s08500
Populus trichocarpa
POPTR_0018s08500
N
0.736
TRIUR3_09734
Triticum urartu
TRIUR3_09734
I
0.735
Gorai.010G096800
Gossypium raimondii
Gorai.010G096800
N
0.729
F775_19148
Aegilops tauschii
F775_19148
I
0.724
Traes_4DL_26A958CDD
Triticum aestivum
Traes_4DL_26A958CDD
I
0.724
Traes_4DL_8A9D9ACCB
Triticum aestivum
Traes_4DL_8A9D9ACCB
I
0.724
F775_17212
Aegilops tauschii
F775_17212
I
0.722
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.722
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.722
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.722
GLYMA11G03770
Glycine max
GLYMA11G03770
N
0.718
28226.m000839
Ricinus communis
28226.m000839
I
0.713
PRUPE_ppa017136mg
Prunus persica
PRUPE_ppa017136mg
I
0.712
Pm027048
Prunus mume
Pm027048
I
0.712
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.710
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.704
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.704
gene12738-v1.0-hybrid
Fragaria vesca
gene12738-v1.0-hybrid
I
0.703
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.702
Pm005573
Prunus mume
Pm005573
I
0.702
MDP0000887107
Malus domestica
MDP0000887107
I
0.701
cassava25868.m1
Manihot esculenta
cassava25868.m1
I
0.699
Ciclev10026498m.g
Citrus clementina
Ciclev10026498m.g
I
0.699
orange1.1g036591m.g
Citrus sinensis
orange1.1g036591m.g
I
0.699
GSMUA_Achr2G17960_001
Musa acuminata
GSMUA_Achr2G17960_001
N
0.697
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.696
POPTR_0017s02990
Populus trichocarpa
POPTR_0017s02990
I
0.695
mgf024953m
Mimulus guttatus
mgf024953m
N
0.695
PDK_20s13009436g002
Phoenix dactylifera
PDK_20s13009436g002
I
0.695
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.691
gene15383-v1.0-hybrid
Fragaria vesca
gene15383-v1.0-hybrid
N
0.690
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.689
Aquca_011_00570
Aquilegia coerulea
Aquca_011_00570
N
0.689
MTR_5g079670
Medicago truncatula
MTR_5g079670
I
0.687
GSMUA_Achr3G21000_001
Musa acuminata
GSMUA_Achr3G21000_001
I
0.686
MDP0000140609
Malus domestica
MDP0000140609
I
0.686
GSMUA_Achr3G27700_001
Musa acuminata
GSMUA_Achr3G27700_001
I
0.685
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.685
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.684
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.684
SapurV1A.0918s0130
Salix purpurea
SapurV1A.0918s0130
I
0.684
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.683
GLYMA02G41440
Glycine max
GLYMA02G41440
I
0.682
GSMUA_Achr11G23500_001
Musa acuminata
GSMUA_Achr11G23500_001
N
0.681
POPTR_0001s04240
Populus trichocarpa
POPTR_0001s04240
I
0.681
mgf001865m
Mimulus guttatus
mgf001865m
I
0.681
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.679
GSMUA_Achr8G14540_001
Musa acuminata
GSMUA_Achr8G14540_001
N
0.678
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.678
AMTR_s00005p00268890
Amborella trichopoda
AMTR_s00005p00268890
I
0.677
POPTR_0010s12420
Populus trichocarpa
POPTR_0010s12420
I
0.677
Solyc05g008250.1
Solanum lycopersicum
Solyc05g008250.1
I
0.677
TCM_010839
Theobroma cacao
TCM_010839
I
0.677
VIT_01s0011g04760
Vitis vinifera
VIT_01s0011g04760
I
0.677
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.677
VIT_17s0000g02660
Vitis vinifera
VIT_17s0000g02660
I
0.677
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.677
cassava6228.valid.m1
Manihot esculenta
cassava6228.valid.m1
I
0.677
Eucgr.B02896
Eucalyptus grandis
Eucgr.B02896
I
0.677
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.677
Gorai.002G180300
Gossypium raimondii
Gorai.002G180300
I
0.677
Gorai.005G162600
Gossypium raimondii
Gorai.005G162600
I
0.677
MDP0000250597
Malus domestica
MDP0000250597
I
0.677
SapurV1A.0390s0200
Salix purpurea
SapurV1A.0390s0200
I
0.677
SapurV1A.1730s0020
Salix purpurea
SapurV1A.1730s0020
I
0.677
PK05970.1
Cannabis sativa
PK05970.1
I
0.677
PK11717.1
Cannabis sativa
PK11717.1
I
0.677
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.676
F775_42516
Aegilops tauschii
F775_42516
I
0.676
GSMUA_Achr4G21700_001
Musa acuminata
GSMUA_Achr4G21700_001
I
0.675
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.675
PGSC0003DMG400030548
Solanum tuberosum
PGSC0003DMG400030548
I
0.674
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.673
PK16315.1
Cannabis sativa
PK16315.1
I
0.673
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.672
MTR_3g083540
Medicago truncatula
MTR_3g083540
I
0.672
cassava2597.m1
Manihot esculenta
cassava2597.m1
I
0.672
chr2.CM0405.380.nd
Lotus japonicus
chr2.CM0405.380.nd
I
0.672
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.671
OB06G16110
Oryza brachyantha
OB06G16110
I
0.671
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.671
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.671
POPTR_0004s08650
Populus trichocarpa
POPTR_0004s08650
I
0.671
VIT_01s0127g00730
Vitis vinifera
VIT_01s0127g00730
I
0.671
Ca_16131
Cicer arietinum
Ca_16131
I
0.671
cassava16245.m1
Manihot esculenta
cassava16245.m1
I
0.671
cassava35464.valid.m1
Manihot esculenta
cassava35464.valid.m1
I
0.671
TCM_037379
Theobroma cacao
TCM_037379
I
0.670
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.670
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.670
TCM_000535
Theobroma cacao
TCM_000535
I
0.669
Eucgr.C03554
Eucalyptus grandis
Eucgr.C03554
I
0.669
PRUPE_ppa014884mg
Prunus persica
PRUPE_ppa014884mg
I
0.668
VIT_09s0002g01410
Vitis vinifera
VIT_09s0002g01410
I
0.668
MDP0000164048
Malus domestica
MDP0000164048
I
0.668
GLYMA07G33960
Glycine max
GLYMA07G33960
I
0.667
GLYMA20G01610
Glycine max
GLYMA20G01610
I
0.667
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.667
POPTR_0008s12750
Populus trichocarpa
POPTR_0008s12750
I
0.667
PRUPE_ppa010716mg
Prunus persica
PRUPE_ppa010716mg
I
0.667
PRUPE_ppa010846mg
Prunus persica
PRUPE_ppa010846mg
I
0.667
TCM_019261
Theobroma cacao
TCM_019261
I
0.667
Pm014372
Prunus mume
Pm014372
I
0.667
Pm029185
Prunus mume
Pm029185
I
0.667
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.667
Gorai.007G179300
Gossypium raimondii
Gorai.007G179300
I
0.667
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.667
SapurV1A.0102s0340
Salix purpurea
SapurV1A.0102s0340
I
0.667
SapurV1A.0120s0010
Salix purpurea
SapurV1A.0120s0010
I
0.667
SapurV1A.0163s0150
Salix purpurea
SapurV1A.0163s0150
I
0.667
GSMUA_Achr5G21090_001
Musa acuminata
GSMUA_Achr5G21090_001
I
0.666
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.666
POPTR_0019s05190
Populus trichocarpa
POPTR_0019s05190
I
0.665
POPTR_0019s05200
Populus trichocarpa
POPTR_0019s05200
I
0.665
POPTR_0019s05210
Populus trichocarpa
POPTR_0019s05210
I
0.665
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.665
TCM_037377
Theobroma cacao
TCM_037377
I
0.665
Pm025102
Prunus mume
Pm025102
I
0.665
Eucgr.B00865
Eucalyptus grandis
Eucgr.B00865
I
0.665
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.665
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.664
Pm013279
Prunus mume
Pm013279
I
0.664
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.664
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.664
MDP0000537324
Malus domestica
MDP0000537324
I
0.664
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.663
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.663
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.662
GSMUA_Achr10G19970_001
Musa acuminata
GSMUA_Achr10G19970_001
I
0.662
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.662
Aquca_002_00170
Aquilegia coerulea
Aquca_002_00170
I
0.662
Ciclev10032713m.g
Citrus clementina
Ciclev10032713m.g
I
0.662
gene09407-v1.0-hybrid
Fragaria vesca
gene09407-v1.0-hybrid
I
0.662
Gorai.003G021100
Gossypium raimondii
Gorai.003G021100
I
0.662
Gorai.013G114900
Gossypium raimondii
Gorai.013G114900
I
0.662
SapurV1A.0035s0030
Salix purpurea
SapurV1A.0035s0030
I
0.662
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.661
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.661
GSMUA_AchrUn_randomG27010_001
Musa acuminata
GSMUA_AchrUn_randomG27010_001
I
0.661
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.661
30076.m004607
Ricinus communis
30076.m004607
I
0.661
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.661
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.661
evm.TU.supercontig_145.21
Carica papaya
evm.TU.supercontig_145.21
I
0.661