CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.362450
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.362450
T284546_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.362450.1
Myb
164
211
KVVWTDFLQYRFLQAVHFIGLDRAVPKKILEVMNVPGLTRENVASHLQ
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla007104
Citrullus lanatus
Cla007104
N
0.781
mgf019327m
Mimulus guttatus
mgf019327m
N
0.738
VIT_16s0100g00420
Vitis vinifera
VIT_16s0100g00420
I
0.710
cassava35050.m1
Manihot esculenta
cassava35050.m1
N
0.710
evm.TU.supercontig_107.3
Carica papaya
evm.TU.supercontig_107.3
N
0.710
30147.m014309
Ricinus communis
30147.m014309
N
0.704
gene03235-v1.0-hybrid
Fragaria vesca
gene03235-v1.0-hybrid
N
0.693
Ciclev10006834m.g
Citrus clementina
Ciclev10006834m.g
N
0.692
orange1.1g043479m.g
Citrus sinensis
orange1.1g043479m.g
N
0.692
MDP0000228719
Malus domestica
MDP0000228719
N
0.691
Ciclev10006586m.g
Citrus clementina
Ciclev10006586m.g
N
0.689
orange1.1g040406m.g
Citrus sinensis
orange1.1g040406m.g
N
0.689
GLYMA16G32311
Glycine max
GLYMA16G32311
I
0.687
GLYMA09G27151
Glycine max
GLYMA09G27151
N
0.677
mgf018042m
Mimulus guttatus
mgf018042m
N
0.673
LjSGA_060038.1
Lotus japonicus
LjSGA_060038.1
I
0.668
POPTR_0015s13860
Populus trichocarpa
POPTR_0015s13860
I
0.662
Ca_20899
Cicer arietinum
Ca_20899
I
0.662