CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.1.4.1
(
Physcomitrella patens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
e_gw1.1.4.1
T284581_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.1.4.1
Myb
1
25
RWSAIASHLPRRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Physcomitrella patens
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.874
MDP0000911051
Malus domestica
MDP0000911051
N
0.874
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.861
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.854
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.845
MYB3
Arabidopsis thaliana
AT1G22640
D
0.836
OS04G0517100
Oryza sativa
OS04G0517100
N
0.830
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
0.811
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
0.811
mg021480m
Mimulus guttatus
mg021480m
N
0.810
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
0.809
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
0.808
mgf020736m
Mimulus guttatus
mgf020736m
N
0.802
MLOC_12474
Hordeum vulgare
MLOC_12474
N
0.801
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N
0.799
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.798
AMTR_s00133p00075670
Amborella trichopoda
AMTR_s00133p00075670
N
0.785
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.780
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.775
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.770
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.768
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
0.768
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
0.768
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
0.768
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
0.768
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
0.767
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.761
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
0.758
MYB95
Arabidopsis thaliana
AT1G74430
N
0.757
MLOC_59184
Hordeum vulgare
MLOC_59184
N
0.757
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.755
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
0.755
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.755
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.752
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
0.752
mgf023771m
Mimulus guttatus
mgf023771m
N
0.749
Bostr.13129s0196
Boechera stricta
Bostr.13129s0196
I
0.749
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.748
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.744
AtMYB41
Arabidopsis thaliana
AT4G28110
D
0.743
GLYMA05G03780
Glycine max
GLYMA05G03780
I
0.743
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.742
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
0.742
Pm000007
Prunus mume
Pm000007
N
0.742
Cagra.7160s0001
Capsella grandiflora
Cagra.7160s0001
N
0.742
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.741
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
0.740
mgf018056m
Mimulus guttatus
mgf018056m
N
0.738
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.738
Traes_1BL_A44464337
Triticum aestivum
Traes_1BL_A44464337
N
0.736
mgf025944m
Mimulus guttatus
mgf025944m
N
0.736
PGSC0003DMG400004610
Solanum tuberosum
PGSC0003DMG400004610
N
0.735
MDP0000119369
Malus domestica
MDP0000119369
N
0.735
OB06G28240
Oryza brachyantha
OB06G28240
N
0.734
TCM_041010
Theobroma cacao
TCM_041010
I
0.734
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.734
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
0.734
MLOC_13019
Hordeum vulgare
MLOC_13019
I
0.732
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
0.728
cassava2659.m1
Manihot esculenta
cassava2659.m1
N
0.726
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.724
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.724
Traes_4BL_61E35C455
Triticum aestivum
Traes_4BL_61E35C455
N
0.724
ATY13
Arabidopsis thaliana
AT1G74650
D
0.722
MLOC_68511
Hordeum vulgare
MLOC_68511
I
0.722
MLOC_59663
Hordeum vulgare
MLOC_59663
I
0.721
gene24516-v1.0-hybrid
Fragaria vesca
gene24516-v1.0-hybrid
N
0.717
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.715
PK21717.1
Cannabis sativa
PK21717.1
N
0.715
AtMYB40
Arabidopsis thaliana
AT5G14340
D
0.713
Traes_2DL_0E9BE0271
Triticum aestivum
Traes_2DL_0E9BE0271
N
0.712
OS01G0685400
Oryza sativa
OS01G0685400
N
0.708
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.708
Pm015551
Prunus mume
Pm015551
N
0.708
chr5.CM0071.390.nd
Lotus japonicus
chr5.CM0071.390.nd
N
0.708
Ca_10215
Cicer arietinum
Ca_10215
N
0.704
OLONG_005719
Oryza longistaminata
OLONG_005719
N
0.696
F775_42755
Aegilops tauschii
F775_42755
N
0.691
Pavir.J06554
Panicum virgatum
Pavir.J06554
N
0.690
AMTR_s00029p00050350
Amborella trichopoda
AMTR_s00029p00050350
N
0.689
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.689
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.689
PGSC0003DMG400013215
Solanum tuberosum
PGSC0003DMG400013215
I
0.687
F775_17614
Aegilops tauschii
F775_17614
N
0.686
F775_15745
Aegilops tauschii
F775_15745
N
0.685
EMIHUDRAFT_256335
Emiliania huxleyi
EMIHUDRAFT_256335
N
0.684
OS08G0548000
Oryza sativa
OS08G0548000
N
0.683
29212.m000177
Ricinus communis
29212.m000177
N
0.670
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
0.669
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
0.667
Bo4g198650
Brassica oleracea
Bo4g198650
N
0.664
GRMZM2G089686
Zea mays
GRMZM2G089686
I
0.664
Bo8g104180
Brassica oleracea
Bo8g104180
N
0.663
MDP0000543585
Malus domestica
MDP0000543585
N
0.662
GRMZM2G177760
Zea mays
GRMZM2G177760
N
0.661