estExt_gwp_gw1.C_2850022 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_gwp_gw1.C_2850022 T284828_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_2850022 Myb 22 80

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.301.32.1 Physcomitrella patens e_gw1.301.32.1 N 0.795
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N 0.737
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.737
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.735
evm.TU.supercontig_137.19 Carica papaya evm.TU.supercontig_137.19 N 0.729
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.704
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.704
Cla013037 Citrullus lanatus Cla013037 N 0.697
cassava14644.m1 Manihot esculenta cassava14644.m1 N 0.690
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.686
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.686
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.684
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.684
POPTR_0003s10360 Populus trichocarpa POPTR_0003s10360 N 0.677
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.674
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.668