CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_87000060
(
Physcomitrella patens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.scaffold_87000060
T284922_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_87000060
Myb
1066
1119
GTPWSASEDQAILALVHDLGPNWELVSDVLSSNSQIKGIYRRPNQCKERHKSLT
Links
Other
Myb/SANT
family TFs
Other
Physcomitrella patens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_2890011
Physcomitrella patens
estExt_fgenesh1_pg.C_2890011
N
0.799
fgenesh1_pg.scaffold_6000180
Physcomitrella patens
fgenesh1_pg.scaffold_6000180
N
0.780
fgenesh1_pg.scaffold_6000188
Physcomitrella patens
fgenesh1_pg.scaffold_6000188
N
0.751
Gorai.004G226000
Gossypium raimondii
Gorai.004G226000
N
0.674
PK23540.1
Cannabis sativa
PK23540.1
N
0.687
SELMODRAFT_425792
Selaginella moellendorffii
SELMODRAFT_425792
N
0.751
Solyc06g083420.1
Solanum lycopersicum
Solyc06g083420.1
N
0.706