CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.13158s0042
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.13158s0042
T285703_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13158s0042.1.p
Myb
13
60
KGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKL
Bostr.13158s0042.1.p
Myb
67
111
GCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSR
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DUO1
Arabidopsis thaliana
AT3G60460
N
0.909
Bra003413
Brassica rapa
Bra003413
N
0.909
DUO1
Arabidopsis lyrata
fgenesh2_kg.5__2511__AT3G60460.1
N
0.909
Bo6g077030
Brassica oleracea
Bo6g077030
N
0.900
Cagra.3527s0008
Capsella grandiflora
Cagra.3527s0008
N
0.884
Carubv10019483m.g
Capsella rubella
Carubv10019483m.g
N
0.884
Thhalv10006475m.g
Eutrema salsugineum
Thhalv10006475m.g
N
0.869
Bo8g095200
Brassica oleracea
Bo8g095200
N
0.860
Bra007536
Brassica rapa
Bra007536
N
0.860
POPTR_0002s14180
Populus trichocarpa
POPTR_0002s14180
N
0.854
SapurV1A.0033s0200
Salix purpurea
SapurV1A.0033s0200
N
0.851
Bostr.13158s0046
Boechera stricta
Bostr.13158s0046
N
0.840
mgf019330m
Mimulus guttatus
mgf019330m
N
0.832
SapurV1A.0490s0170
Salix purpurea
SapurV1A.0490s0170
N
0.832
LjT36B17.50.nd
Lotus japonicus
LjT36B17.50.nd
N
0.830
Cucsa.121070
Cucumis sativus
Cucsa.121070
N
0.825
POPTR_0014s05370
Populus trichocarpa
POPTR_0014s05370
N
0.824
POPTR_0014s05420
Populus trichocarpa
POPTR_0014s05420
N
0.824
TCM_005653
Theobroma cacao
TCM_005653
N
0.824
evm.TU.supercontig_37.96
Carica papaya
evm.TU.supercontig_37.96
N
0.824
Solyc01g090530.1
Solanum lycopersicum
Solyc01g090530.1
N
0.818
PGSC0003DMG400025720
Solanum tuberosum
PGSC0003DMG400025720
N
0.815
Cla006831
Citrullus lanatus
Cla006831
N
0.815
DUO1
Vitis vinifera
VIT_15s0021g02040
N
0.807
30174.m008784
Ricinus communis
30174.m008784
N
0.807
Ciclev10021345m.g
Citrus clementina
Ciclev10021345m.g
N
0.807
orange1.1g038795m.g
Citrus sinensis
orange1.1g038795m.g
N
0.807
PRUPE_ppa020326mg
Prunus persica
PRUPE_ppa020326mg
N
0.804
Pm017596
Prunus mume
Pm017596
N
0.804
MDP0000237596
Malus domestica
MDP0000237596
N
0.804
MDP0000319634
Malus domestica
MDP0000319634
N
0.804
PRUPE_ppa016603mg
Prunus persica
PRUPE_ppa016603mg
N
0.796
Pm019530
Prunus mume
Pm019530
N
0.796
Pm031387
Prunus mume
Pm031387
N
0.796
Eucgr.E01581
Eucalyptus grandis
Eucgr.E01581
N
0.796
cassava19913.m1
Manihot esculenta
cassava19913.m1
N
0.793
Si012032m.g
Setaria italica
Si012032m.g
N
0.791
Ca_18954
Cicer arietinum
Ca_18954
N
0.791
Pavir.Gb01130
Panicum virgatum
Pavir.Gb01130
N
0.791
Pavir.Fb01900
Panicum virgatum
Pavir.Fb01900
N
0.786
MTR_8g006470
Medicago truncatula
MTR_8g006470
N
0.783
Pavir.J30013
Panicum virgatum
Pavir.J30013
N
0.783
Pavir.J35399
Panicum virgatum
Pavir.J35399
N
0.783
Solyc10g019260.1
Solanum lycopersicum
Solyc10g019260.1
N
0.780
Traes_2AL_0A21FB42C
Triticum aestivum
Traes_2AL_0A21FB42C
N
0.780
Traes_2BL_855A1170C
Triticum aestivum
Traes_2BL_855A1170C
N
0.780
GLYMA03G26830
Glycine max
GLYMA03G26830
N
0.777
Gorai.004G165400
Gossypium raimondii
Gorai.004G165400
N
0.777
BGIOSGA016880
Oryza indica
BGIOSGA016880
N
0.776
OB04G27810
Oryza brachyantha
OB04G27810
N
0.776
OBART04G20790
Oryza barthii
OBART04G20790
N
0.776
OGLUM04G20730
Oryza glumaepatula
OGLUM04G20730
N
0.776
OMERI04G17240
Oryza meridionalis
OMERI04G17240
N
0.776
ONIVA04G19030
Oryza nivara
ONIVA04G19030
N
0.776
OPUNC04G18480
Oryza punctata
OPUNC04G18480
N
0.776
ORGLA04G0178400
Oryza glaberrima
ORGLA04G0178400
N
0.776
ORUFI04G22380
Oryza rufipogon
ORUFI04G22380
N
0.776
gene04800-v1.0-hybrid
Fragaria vesca
gene04800-v1.0-hybrid
N
0.776
GRMZM2G105137
Zea mays
GRMZM2G105137
N
0.775
GLYMA07G14480
Glycine max
GLYMA07G14480
N
0.768
cassava17368.m1
Manihot esculenta
cassava17368.m1
N
0.760
gene12261-v1.0-hybrid
Fragaria vesca
gene12261-v1.0-hybrid
N
0.759
Pavir.Fa00479
Panicum virgatum
Pavir.Fa00479
N
0.755
Traes_2DL_912473A86
Triticum aestivum
Traes_2DL_912473A86
N
0.754
Aquca_081_00025
Aquilegia coerulea
Aquca_081_00025
N
0.753
MTR_4g029540
Medicago truncatula
MTR_4g029540
N
0.752
Si015815m.g
Setaria italica
Si015815m.g
N
0.752
BRADI5G17600
Brachypodium distachyon
BRADI5G17600
N
0.751
Sb06g024510
Sorghum bicolor
Sb06g024510
N
0.747
GRMZM2G311059
Zea mays
GRMZM2G311059
N
0.737
Aquca_002_00029
Aquilegia coerulea
Aquca_002_00029
N
0.737
Sb07g027160
Sorghum bicolor
Sb07g027160
N
0.735
Lus10009780.g
Linum usitatissimum
Lus10009780.g
N
0.731
AMTR_s00111p00072510
Amborella trichopoda
AMTR_s00111p00072510
N
0.723
GSMUA_Achr1G01660_001
Musa acuminata
GSMUA_Achr1G01660_001
N
0.722
GLYMA09G00371
Glycine max
GLYMA09G00371
N
0.721
GLYMA12G37026
Glycine max
GLYMA12G37026
N
0.718
GRMZM2G046443
Zea mays
GRMZM2G046443
N
0.718
TCM_014872
Theobroma cacao
TCM_014872
N
0.717
Cla010897
Citrullus lanatus
Cla010897
N
0.709
Ca_19557
Cicer arietinum
Ca_19557
N
0.702
Gorai.003G112700
Gossypium raimondii
Gorai.003G112700
N
0.689
Cucsa.094180
Cucumis sativus
Cucsa.094180
N
0.684
SELMODRAFT_116971
Selaginella moellendorffii
SELMODRAFT_116971
N
0.677
SELMODRAFT_118852
Selaginella moellendorffii
SELMODRAFT_118852
N
0.677
mgf004314m
Mimulus guttatus
mgf004314m
N
0.675
LPERR04G16870
Leersia perrieri
LPERR04G16870
N
0.674