CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.18473s0331
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.18473s0331
T285726_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.630
1.000
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.18473s0331.1.p
Myb
5
26
GGHTSGLNRTGKSCRLRWVNYL
Bostr.18473s0331.1.p
Myb
32
77
RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHM
Bostr.18473s0331.2.p
Myb
5
26
GGHTSGLNRTGKSCRLRWVNYL
Bostr.18473s0331.2.p
Myb
32
77
RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHM
Bostr.18473s0331.3.p
Myb
1
43
MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHM
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.909
MYB59
Arabidopsis thaliana
AT5G59780
D
0.909
cassava29437.valid.m1
Manihot esculenta
cassava29437.valid.m1
N
0.909
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
0.909
Carubv10027237m.g
Capsella rubella
Carubv10027237m.g
N
0.909
Eucgr.B02401
Eucalyptus grandis
Eucgr.B02401
N
0.909
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.909
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.909
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.909
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.905
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.903
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.902
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.902
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
0.899
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.893
Solyc06g005310.2
Solanum lycopersicum
Solyc06g005310.2
N
0.893
Ca_16710
Cicer arietinum
Ca_16710
N
0.891
cassava13590.valid.m1
Manihot esculenta
cassava13590.valid.m1
N
0.891
PK27824.1
Cannabis sativa
PK27824.1
N
0.891
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.887
Cagra.1317s0038
Capsella grandiflora
Cagra.1317s0038
N
0.886
gene13970-v1.0-hybrid
Fragaria vesca
gene13970-v1.0-hybrid
N
0.886
Lus10040861.g
Linum usitatissimum
Lus10040861.g
N
0.885
PGSC0003DMG400030397
Solanum tuberosum
PGSC0003DMG400030397
N
0.883
Solyc06g075660.2
Solanum lycopersicum
Solyc06g075660.2
N
0.883
Bostr.26833s0259
Boechera stricta
Bostr.26833s0259
N
0.880
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
0.878
Ciclev10029019m.g
Citrus clementina
Ciclev10029019m.g
N
0.871
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
0.871
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.869
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.869
Aquca_027_00267
Aquilegia coerulea
Aquca_027_00267
N
0.849
mgf009707m
Mimulus guttatus
mgf009707m
N
0.848
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.846
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.846
Traes_5AS_7D519210E
Triticum aestivum
Traes_5AS_7D519210E
N
0.842
Traes_5BS_D1C03C165
Triticum aestivum
Traes_5BS_D1C03C165
N
0.842
Traes_5DS_1EF547639
Triticum aestivum
Traes_5DS_1EF547639
N
0.842
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.841
Traes_1BS_060C24872
Triticum aestivum
Traes_1BS_060C24872
N
0.841
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.837
OBART12G16130
Oryza barthii
OBART12G16130
N
0.837
OGLUM12G17720
Oryza glumaepatula
OGLUM12G17720
N
0.837
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.837
PGSC0003DMG402010883
Solanum tuberosum
PGSC0003DMG402010883
N
0.834
Si023104m.g
Setaria italica
Si023104m.g
I
0.823
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.823
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.823
Sb05g027370
Sorghum bicolor
Sb05g027370
N
0.817
Si026803m.g
Setaria italica
Si026803m.g
I
0.817
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
0.817
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.817
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
0.817
cassava11833.valid.m1
Manihot esculenta
cassava11833.valid.m1
N
0.814
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
0.810
Si003873m.g
Setaria italica
Si003873m.g
N
0.805
MLOC_78504
Hordeum vulgare
MLOC_78504
I
0.799
Bo3g017760
Brassica oleracea
Bo3g017760
N
0.795
mgf001247m
Mimulus guttatus
mgf001247m
N
0.794
MYB24
Arabidopsis thaliana
AT5G40350
D
0.793
Pavir.J23620
Panicum virgatum
Pavir.J23620
N
0.791
Traes_5AS_D9A4C1AB0
Triticum aestivum
Traes_5AS_D9A4C1AB0
N
0.790
MYB21
Arabidopsis thaliana
AT3G27810
I
0.789
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.789
GLYMA12G07110
Glycine max
GLYMA12G07110
I
0.789
OS01G0975300
Oryza sativa
OS01G0975300
N
0.789
MLOC_17928
Hordeum vulgare
MLOC_17928
I
0.782
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
0.781
MDP0000139931
Malus domestica
MDP0000139931
N
0.780
MDP0000169874
Malus domestica
MDP0000169874
N
0.780
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
0.778
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.772
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
0.772
GLYMA11G15180
Glycine max
GLYMA11G15180
I
0.771
Pavir.Gb01276
Panicum virgatum
Pavir.Gb01276
N
0.770
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.768
evm.TU.supercontig_87.85
Carica papaya
evm.TU.supercontig_87.85
N
0.766
TCM_021433
Theobroma cacao
TCM_021433
I
0.765
Gorai.013G139200
Gossypium raimondii
Gorai.013G139200
I
0.765
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
0.765
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
0.765
Traes_2BL_DAA2104F5
Triticum aestivum
Traes_2BL_DAA2104F5
N
0.763
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.762
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.760
PDK_20s1528141g001
Phoenix dactylifera
PDK_20s1528141g001
N
0.758
BGIOSGA037085
Oryza indica
BGIOSGA037085
N
0.756
BGIOSGA027658
Oryza indica
BGIOSGA027658
N
0.754
F775_22650
Aegilops tauschii
F775_22650
N
0.753
mgf018110m
Mimulus guttatus
mgf018110m
N
0.753
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
0.752
fgenesh2_kg.397__1__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.397__1__AT3G24310.1
N
0.751
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.751
evm.TU.contig_33658
Carica papaya
evm.TU.contig_33658
N
0.750
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
0.749
mgf021749m
Mimulus guttatus
mgf021749m
N
0.748
MYB27
Arabidopsis thaliana
AT3G53200
D
0.747
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.746
GRMZM2G106558
Zea mays
GRMZM2G106558
I
0.745
PRUPE_ppa008906mg
Prunus persica
PRUPE_ppa008906mg
I
0.745
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
0.741
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.740
TRIUR3_32110
Triticum urartu
TRIUR3_32110
N
0.740
MDP0000475808
Malus domestica
MDP0000475808
N
0.739
MYB86
Arabidopsis thaliana
AT5G26660
I
0.736
Cagra.1390s0010
Capsella grandiflora
Cagra.1390s0010
I
0.733
Thhalv10022197m.g
Eutrema salsugineum
Thhalv10022197m.g
N
0.733
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.731
GRMZM2G305856
Zea mays
GRMZM2G305856
I
0.730
TCM_005371
Theobroma cacao
TCM_005371
I
0.730
Traes_2DL_77F235694
Triticum aestivum
Traes_2DL_77F235694
N
0.730
MDP0000153773
Malus domestica
MDP0000153773
N
0.727
orange1.1g044587m.g
Citrus sinensis
orange1.1g044587m.g
N
0.726
PDK_20s1354851g002
Phoenix dactylifera
PDK_20s1354851g002
N
0.726
TRIUR3_12300
Triticum urartu
TRIUR3_12300
N
0.722
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.721
WER
Arabidopsis thaliana
AT5G14750
D
0.720
30147.m013749
Ricinus communis
30147.m013749
N
0.720
Pavir.Fa00877
Panicum virgatum
Pavir.Fa00877
I
0.720
AtMYB10
Arabidopsis thaliana
AT3G12820
D
0.719
BRADI1G45510
Brachypodium distachyon
BRADI1G45510
I
0.719
Pavir.J24653
Panicum virgatum
Pavir.J24653
N
0.719
Bo5g131980
Brassica oleracea
Bo5g131980
N
0.718
BRADI2G11080
Brachypodium distachyon
BRADI2G11080
I
0.718
TT2
Arabidopsis thaliana
AT5G35550
I
0.717
Traes_2DL_304E62CCE
Triticum aestivum
Traes_2DL_304E62CCE
N
0.712
Bra009910
Brassica rapa
Bra009910
N
0.710
MLOC_13019
Hordeum vulgare
MLOC_13019
I
0.710
Cagra.2519s0060
Capsella grandiflora
Cagra.2519s0060
N
0.710
SapurV1A.1387s0090
Salix purpurea
SapurV1A.1387s0090
I
0.710
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
0.709
MYB114
Arabidopsis thaliana
AT1G66380
I
0.702
BGIOSGA002307
Oryza indica
BGIOSGA002307
N
0.702
GLYMA16G00920
Glycine max
GLYMA16G00920
I
0.702
Bostr.3125s0001
Boechera stricta
Bostr.3125s0001
N
0.702
Traes_3DL_75F8A05CF
Triticum aestivum
Traes_3DL_75F8A05CF
N
0.700
F775_32151
Aegilops tauschii
F775_32151
N
0.698
GRMZM2G032180
Zea mays
GRMZM2G032180
N
0.698
Traes_2AL_E8C400686
Triticum aestivum
Traes_2AL_E8C400686
N
0.697
Cagra.1655s0054
Capsella grandiflora
Cagra.1655s0054
N
0.695
Cagra.17198s0001
Capsella grandiflora
Cagra.17198s0001
N
0.694
Bra031041
Brassica rapa
Bra031041
N
0.693
LjSGA_148662.1
Lotus japonicus
LjSGA_148662.1
N
0.693
OLONG_004747
Oryza longistaminata
OLONG_004747
N
0.692
Ca_11427
Cicer arietinum
Ca_11427
N
0.692
30072.m000986
Ricinus communis
30072.m000986
N
0.692
PDK_20s1338951g004
Phoenix dactylifera
PDK_20s1338951g004
N
0.691
MLOC_56753
Hordeum vulgare
MLOC_56753
I
0.689
Traes_2DS_EEE59C2E7
Triticum aestivum
Traes_2DS_EEE59C2E7
N
0.689
LjSGA_032074.1
Lotus japonicus
LjSGA_032074.1
N
0.689
PDK_20s1933711g001
Phoenix dactylifera
PDK_20s1933711g001
N
0.689
mgf026560m
Mimulus guttatus
mgf026560m
N
0.688
mgf026463m
Mimulus guttatus
mgf026463m
N
0.687
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
0.686
PGSC0003DMG400013172
Solanum tuberosum
PGSC0003DMG400013172
N
0.686
Al_scaffold_0002_1204
Arabidopsis lyrata
Al_scaffold_0002_1204
N
0.684
GLYMA08G44950
Glycine max
GLYMA08G44950
N
0.684
Pavir.J19088
Panicum virgatum
Pavir.J19088
N
0.684
Pm029438
Prunus mume
Pm029438
N
0.683
Ciclev10006469m.g
Citrus clementina
Ciclev10006469m.g
N
0.683
PK16488.1
Cannabis sativa
PK16488.1
N
0.683
PK22178.1
Cannabis sativa
PK22178.1
N
0.683
SapurV1A.0552s0030
Salix purpurea
SapurV1A.0552s0030
I
0.682
Bo2g011790
Brassica oleracea
Bo2g011790
N
0.681
VIT_02s0033g00460
Vitis vinifera
VIT_02s0033g00460
N
0.680
LjT39N06.160.nd
Lotus japonicus
LjT39N06.160.nd
N
0.680
PDK_20s1415541g003
Phoenix dactylifera
PDK_20s1415541g003
N
0.679
MDP0000242612
Malus domestica
MDP0000242612
N
0.678
PDK_20s1316381g001
Phoenix dactylifera
PDK_20s1316381g001
N
0.678
MYB94
Arabidopsis thaliana
AT3G47600
D
0.676
MDP0000581761
Malus domestica
MDP0000581761
N
0.673
MDP0000244980
Malus domestica
MDP0000244980
N
0.669
TRIUR3_33813
Triticum urartu
TRIUR3_33813
N
0.668
TCM_013983
Theobroma cacao
TCM_013983
I
0.667
TCM_032927
Theobroma cacao
TCM_032927
I
0.666
Gorai.004G064100
Gossypium raimondii
Gorai.004G064100
I
0.664
MDP0000470422
Malus domestica
MDP0000470422
N
0.664
OBART01G27550
Oryza barthii
OBART01G27550
N
0.663
Traes_5AL_D1807A4E0
Triticum aestivum
Traes_5AL_D1807A4E0
N
0.663
ORGLA01G0040600
Oryza glaberrima
ORGLA01G0040600
N
0.662
ATMYB48-1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001097
I
0.630
Carubv10017875m.g
Capsella rubella
Carubv10017875m.g
I
0.630