CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.25993s0044
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.25993s0044
T285795_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.674
0.688
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.25993s0044.1.p
Myb
21
68
KGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYL
Bostr.25993s0044.1.p
Myb
74
119
RGNITLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRV
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATMYB2
Arabidopsis thaliana
AT2G47190
I
0.909
Bo00954s080
Brassica oleracea
Bo00954s080
I
0.909
Bo4g198510
Brassica oleracea
Bo4g198510
I
0.909
Bra004473
Brassica rapa
Bra004473
I
0.909
Bra021389
Brassica rapa
Bra021389
I
0.909
ATMYB2
Arabidopsis lyrata
fgenesh2_kg.4__2955__AT2G47190.1
I
0.909
Cagra.6400s0003
Capsella grandiflora
Cagra.6400s0003
I
0.909
Carubv10023831m.g
Capsella rubella
Carubv10023831m.g
I
0.909
Thhalv10001584m.g
Eutrema salsugineum
Thhalv10001584m.g
I
0.909
GLYMA03G38070
Glycine max
GLYMA03G38070
I
0.738
GLYMA19G40670
Glycine max
GLYMA19G40670
I
0.738
Ciclev10021479m.g
Citrus clementina
Ciclev10021479m.g
I
0.728
orange1.1g043269m.g
Citrus sinensis
orange1.1g043269m.g
I
0.728
MDP0000823458
Malus domestica
MDP0000823458
I
0.721
cassava39393.m1
Manihot esculenta
cassava39393.m1
I
0.720
TCM_004878
Theobroma cacao
TCM_004878
I
0.717
Gorai.004G145800
Gossypium raimondii
Gorai.004G145800
I
0.717
30076.m004607
Ricinus communis
30076.m004607
I
0.713
Cucsa.252400
Cucumis sativus
Cucsa.252400
I
0.713
MTR_1g086530
Medicago truncatula
MTR_1g086530
I
0.705
PK10896.1
Cannabis sativa
PK10896.1
I
0.704
Gorai.007G121000
Gossypium raimondii
Gorai.007G121000
I
0.702
Gorai.003G136400
Gossypium raimondii
Gorai.003G136400
I
0.700
Bo3g130340
Brassica oleracea
Bo3g130340
I
0.696
Bra018223
Brassica rapa
Bra018223
I
0.696
Eucgr.H00907
Eucalyptus grandis
Eucgr.H00907
I
0.694
evm.TU.supercontig_190.35
Carica papaya
evm.TU.supercontig_190.35
I
0.691
PRUPE_ppa015973mg
Prunus persica
PRUPE_ppa015973mg
I
0.690
cassava33046.m1
Manihot esculenta
cassava33046.m1
I
0.690
Cla022143
Citrullus lanatus
Cla022143
I
0.689
ATMYB2
Vitis vinifera
VIT_07s0005g01950
I
0.685
evm.TU.supercontig_145.21
Carica papaya
evm.TU.supercontig_145.21
I
0.684
Bo5g043390
Brassica oleracea
Bo5g043390
I
0.680
Eucgr.H04082
Eucalyptus grandis
Eucgr.H04082
I
0.680
MDP0000143156
Malus domestica
MDP0000143156
I
0.680
AMTR_s00003p00219710
Amborella trichopoda
AMTR_s00003p00219710
I
0.679
Gorai.006G080800
Gossypium raimondii
Gorai.006G080800
I
0.679
GSMUA_Achr10G26730_001
Musa acuminata
GSMUA_Achr10G26730_001
I
0.678
Cla008413
Citrullus lanatus
Cla008413
I
0.678
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.678
Eucgr.K03562
Eucalyptus grandis
Eucgr.K03562
I
0.678
cassava25455.m1
Manihot esculenta
cassava25455.m1
I
0.677
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.674
MYB59
Arabidopsis thaliana
AT5G59780
D
0.674
Bo2g025410
Brassica oleracea
Bo2g025410
I
0.674
Bo9g140750
Brassica oleracea
Bo9g140750
I
0.674
Bra002533
Brassica rapa
Bra002533
I
0.674
Bra006694
Brassica rapa
Bra006694
I
0.674
Bra020289
Brassica rapa
Bra020289
I
0.674
F775_08129
Aegilops tauschii
F775_08129
I
0.674
ATMYB48-1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001097
I
0.674
MYB59
Arabidopsis lyrata
fgenesh2_kg.8__1928__AT5G59780.3
I
0.674
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.674
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.674
GRMZM2G070849
Zea mays
GRMZM2G070849
I
0.674
MLOC_6821
Hordeum vulgare
MLOC_6821
I
0.674
PRUPE_ppa015954mg
Prunus persica
PRUPE_ppa015954mg
I
0.674
TCM_041904
Theobroma cacao
TCM_041904
I
0.674
Traes_5BS_95A52A87F
Triticum aestivum
Traes_5BS_95A52A87F
I
0.674
Traes_5DS_DE2C70E4C
Triticum aestivum
Traes_5DS_DE2C70E4C
I
0.674
VIT_06s0004g04140
Vitis vinifera
VIT_06s0004g04140
I
0.674
Pm000809
Prunus mume
Pm000809
I
0.674
Cucsa.128620
Cucumis sativus
Cucsa.128620
I
0.674
Carubv10017875m.g
Capsella rubella
Carubv10017875m.g
I
0.674
Gorai.005G068900
Gossypium raimondii
Gorai.005G068900
I
0.674
MDP0000177010
Malus domestica
MDP0000177010
I
0.674
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
0.674
SapurV1A.0008s0940
Salix purpurea
SapurV1A.0008s0940
I
0.674
SapurV1A.0008s0950
Salix purpurea
SapurV1A.0008s0950
I
0.674
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.674
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.674
PK21537.1
Cannabis sativa
PK21537.1
I
0.674
F775_23572
Aegilops tauschii
F775_23572
I
0.673
Traes_6AL_89BA7115C
Triticum aestivum
Traes_6AL_89BA7115C
I
0.673
Traes_6DL_FDFCBA57D1
Triticum aestivum
Traes_6DL_FDFCBA57D1
I
0.673
Traes_6DL_FDFCBA57D
Triticum aestivum
Traes_6DL_FDFCBA57D
I
0.673
TRIUR3_31527
Triticum urartu
TRIUR3_31527
I
0.673
evm.TU.supercontig_14.220
Carica papaya
evm.TU.supercontig_14.220
I
0.672
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.672
POPTR_0001s24220
Populus trichocarpa
POPTR_0001s24220
I
0.671
POPTR_0009s03240
Populus trichocarpa
POPTR_0009s03240
I
0.671
Cla013488
Citrullus lanatus
Cla013488
I
0.671
29788.m000340
Ricinus communis
29788.m000340
I
0.671
cassava13589.valid.m1
Manihot esculenta
cassava13589.valid.m1
I
0.671
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.671
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.671
Lus10005886.g
Linum usitatissimum
Lus10005886.g
I
0.671
Lus10009037.g
Linum usitatissimum
Lus10009037.g
I
0.671
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.671
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.671
GLYMA07G36430
Glycine max
GLYMA07G36430
I
0.669
GSMUA_Achr2G16200_001
Musa acuminata
GSMUA_Achr2G16200_001
I
0.669
POPTR_0008s10080
Populus trichocarpa
POPTR_0008s10080
I
0.668
POPTR_0010s15970
Populus trichocarpa
POPTR_0010s15970
I
0.668
cassava45669.m1
Manihot esculenta
cassava45669.m1
I
0.668
Ciclev10005387m.g
Citrus clementina
Ciclev10005387m.g
I
0.668
Lus10017096.g
Linum usitatissimum
Lus10017096.g
I
0.668
Lus10037818.g
Linum usitatissimum
Lus10037818.g
I
0.668
orange1.1g019911m.g
Citrus sinensis
orange1.1g019911m.g
I
0.668
SapurV1A.0050s0080
Salix purpurea
SapurV1A.0050s0080
I
0.668
SapurV1A.0114s0410
Salix purpurea
SapurV1A.0114s0410
I
0.668
SapurV1A.6591s0010
Salix purpurea
SapurV1A.6591s0010
I
0.668
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.667
Eucgr.B03985
Eucalyptus grandis
Eucgr.B03985
I
0.667
Thhalv10021126m.g
Eutrema salsugineum
Thhalv10021126m.g
I
0.667
Eucgr.B03006
Eucalyptus grandis
Eucgr.B03006
I
0.665
Cla015409
Citrullus lanatus
Cla015409
I
0.664
MTR_1g086510
Medicago truncatula
MTR_1g086510
I
0.663
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.663
Ca_02593
Cicer arietinum
Ca_02593
I
0.663
GLYMA09G03690
Glycine max
GLYMA09G03690
I
0.662
GLYMA15G14620
Glycine max
GLYMA15G14620
I
0.662
MTR_2g033170
Medicago truncatula
MTR_2g033170
I
0.662
Ca_08069
Cicer arietinum
Ca_08069
I
0.662
Aquca_041_00011
Aquilegia coerulea
Aquca_041_00011
I
0.662