CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26833s0259
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.26833s0259
T285813_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26833s0259.1.p
Myb
16
36
NIRIGLKRTGKSCRLRWVNYL
Bostr.26833s0259.1.p
Myb
42
87
RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHM
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB59
Arabidopsis thaliana
AT5G59780
D
0.903
Cagra.1317s0038
Capsella grandiflora
Cagra.1317s0038
N
0.903
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.903
gene13970-v1.0-hybrid
Fragaria vesca
gene13970-v1.0-hybrid
N
0.885
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.885
PK27824.1
Cannabis sativa
PK27824.1
N
0.884
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.880
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
0.880
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
0.880
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
0.870
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.868
Ciclev10029019m.g
Citrus clementina
Ciclev10029019m.g
N
0.861
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
0.861
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.857
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.854
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.845
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.845
mgf009707m
Mimulus guttatus
mgf009707m
N
0.835
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.831
OBART12G16130
Oryza barthii
OBART12G16130
N
0.831
OGLUM12G17720
Oryza glumaepatula
OGLUM12G17720
N
0.831
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.831
Traes_5AS_7D519210E
Triticum aestivum
Traes_5AS_7D519210E
N
0.831
Traes_5BS_D1C03C165
Triticum aestivum
Traes_5BS_D1C03C165
N
0.831
Traes_5DS_1EF547639
Triticum aestivum
Traes_5DS_1EF547639
N
0.831
Eucgr.B02401
Eucalyptus grandis
Eucgr.B02401
N
0.825
cassava11833.valid.m1
Manihot esculenta
cassava11833.valid.m1
N
0.819
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
0.804
mgf001247m
Mimulus guttatus
mgf001247m
N
0.799
MYB21
Arabidopsis thaliana
AT3G27810
I
0.795
MYB24
Arabidopsis thaliana
AT5G40350
D
0.795
Bo3g017760
Brassica oleracea
Bo3g017760
N
0.789
OS01G0975300
Oryza sativa
OS01G0975300
N
0.789
Si003873m.g
Setaria italica
Si003873m.g
N
0.782
Pavir.J23620
Panicum virgatum
Pavir.J23620
N
0.779
Traes_2BL_DAA2104F5
Triticum aestivum
Traes_2BL_DAA2104F5
N
0.778
Pavir.Gb01276
Panicum virgatum
Pavir.Gb01276
N
0.776
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
0.775
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
0.773
Traes_5AS_D9A4C1AB0
Triticum aestivum
Traes_5AS_D9A4C1AB0
N
0.772
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
0.772
MYB27
Arabidopsis thaliana
AT3G53200
D
0.771
MLOC_17928
Hordeum vulgare
MLOC_17928
I
0.770
MDP0000139931
Malus domestica
MDP0000139931
N
0.763
MDP0000169874
Malus domestica
MDP0000169874
N
0.763
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.757
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.754
TCM_021433
Theobroma cacao
TCM_021433
I
0.753
BGIOSGA037085
Oryza indica
BGIOSGA037085
N
0.752
F775_22650
Aegilops tauschii
F775_22650
N
0.752
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.749
PDK_20s1528141g001
Phoenix dactylifera
PDK_20s1528141g001
N
0.749
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
0.747
Gorai.013G139200
Gossypium raimondii
Gorai.013G139200
I
0.747
TRIUR3_32110
Triticum urartu
TRIUR3_32110
N
0.746
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
0.746
GRMZM2G106558
Zea mays
GRMZM2G106558
I
0.745
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.745
evm.TU.supercontig_87.85
Carica papaya
evm.TU.supercontig_87.85
N
0.743
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
0.742
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
0.742
MYB86
Arabidopsis thaliana
AT5G26660
I
0.741
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
0.740
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.740
Cagra.1390s0010
Capsella grandiflora
Cagra.1390s0010
I
0.738
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.737
TCM_005371
Theobroma cacao
TCM_005371
I
0.735
GRMZM2G305856
Zea mays
GRMZM2G305856
I
0.734
MDP0000475808
Malus domestica
MDP0000475808
N
0.734
BGIOSGA027658
Oryza indica
BGIOSGA027658
N
0.732
mgf018110m
Mimulus guttatus
mgf018110m
N
0.730
TT2
Arabidopsis thaliana
AT5G35550
I
0.727
PRUPE_ppa008906mg
Prunus persica
PRUPE_ppa008906mg
I
0.727
evm.TU.contig_33658
Carica papaya
evm.TU.contig_33658
N
0.727
Cagra.2519s0060
Capsella grandiflora
Cagra.2519s0060
N
0.724
TRIUR3_12300
Triticum urartu
TRIUR3_12300
N
0.722
PDK_20s1354851g002
Phoenix dactylifera
PDK_20s1354851g002
N
0.721
WER
Arabidopsis thaliana
AT5G14750
D
0.720
30147.m013749
Ricinus communis
30147.m013749
N
0.720
mgf021749m
Mimulus guttatus
mgf021749m
N
0.720
Pavir.Fa00877
Panicum virgatum
Pavir.Fa00877
I
0.720
MLOC_13019
Hordeum vulgare
MLOC_13019
I
0.719
Pavir.J24653
Panicum virgatum
Pavir.J24653
N
0.719
BRADI1G45510
Brachypodium distachyon
BRADI1G45510
I
0.718
Bra009910
Brassica rapa
Bra009910
N
0.715
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.713
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.712
SapurV1A.1387s0090
Salix purpurea
SapurV1A.1387s0090
I
0.710
BRADI2G11080
Brachypodium distachyon
BRADI2G11080
I
0.709
MDP0000153773
Malus domestica
MDP0000153773
N
0.709
orange1.1g044587m.g
Citrus sinensis
orange1.1g044587m.g
N
0.709
GLYMA16G00920
Glycine max
GLYMA16G00920
I
0.708
Bo5g131980
Brassica oleracea
Bo5g131980
N
0.700
Traes_3DL_75F8A05CF
Triticum aestivum
Traes_3DL_75F8A05CF
N
0.700
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
0.700
GRMZM2G032180
Zea mays
GRMZM2G032180
N
0.698
BGIOSGA002307
Oryza indica
BGIOSGA002307
N
0.697
MYB114
Arabidopsis thaliana
AT1G66380
I
0.696
AtMYB10
Arabidopsis thaliana
AT3G12820
D
0.696
Bostr.3125s0001
Boechera stricta
Bostr.3125s0001
N
0.696
LjSGA_148662.1
Lotus japonicus
LjSGA_148662.1
N
0.693
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
0.691
GLYMA08G44950
Glycine max
GLYMA08G44950
N
0.689
Traes_2DL_304E62CCE
Triticum aestivum
Traes_2DL_304E62CCE
N
0.689
VIT_02s0033g00460
Vitis vinifera
VIT_02s0033g00460
N
0.689
Bra031041
Brassica rapa
Bra031041
N
0.688
mgf026560m
Mimulus guttatus
mgf026560m
N
0.682
F775_32151
Aegilops tauschii
F775_32151
N
0.680
PDK_20s1933711g001
Phoenix dactylifera
PDK_20s1933711g001
N
0.680
Bo2g011790
Brassica oleracea
Bo2g011790
N
0.676
Traes_2AL_E8C400686
Triticum aestivum
Traes_2AL_E8C400686
N
0.674
Pm029438
Prunus mume
Pm029438
N
0.674
PDK_20s1316381g001
Phoenix dactylifera
PDK_20s1316381g001
N
0.674
Cagra.1655s0054
Capsella grandiflora
Cagra.1655s0054
N
0.673
TRIUR3_33813
Triticum urartu
TRIUR3_33813
N
0.672
Cagra.17198s0001
Capsella grandiflora
Cagra.17198s0001
N
0.671
LjSGA_032074.1
Lotus japonicus
LjSGA_032074.1
N
0.671
OLONG_004747
Oryza longistaminata
OLONG_004747
N
0.670
Al_scaffold_0002_1204
Arabidopsis lyrata
Al_scaffold_0002_1204
N
0.669
PDK_20s1338951g004
Phoenix dactylifera
PDK_20s1338951g004
N
0.668
MYB94
Arabidopsis thaliana
AT3G47600
D
0.667
MLOC_56753
Hordeum vulgare
MLOC_56753
I
0.666
TCM_032927
Theobroma cacao
TCM_032927
I
0.666
Traes_2DS_EEE59C2E7
Triticum aestivum
Traes_2DS_EEE59C2E7
N
0.666
mgf026463m
Mimulus guttatus
mgf026463m
N
0.664
SapurV1A.0552s0030
Salix purpurea
SapurV1A.0552s0030
I
0.664
PGSC0003DMG400013172
Solanum tuberosum
PGSC0003DMG400013172
N
0.663
MDP0000242612
Malus domestica
MDP0000242612
N
0.663
ORGLA01G0040600
Oryza glaberrima
ORGLA01G0040600
N
0.662
Pavir.J19088
Panicum virgatum
Pavir.J19088
N
0.661