Bostr.7867s0704 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.7867s0704 T285912_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.909 1.000
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.782 0.915
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.782 0.894
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.782 0.894
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.741 0.894
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.741 0.894
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.717 0.787
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.717 0.787
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.685 0.787
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.685 0.787
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.685 0.787
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.685 0.787
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.661 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7867s0704.1.p Myb 230 281
Bostr.7867s0704.2.p Myb 230 281

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

454 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pm.00083_#_41 Aspergillus carbonarius fgenesh1_pm.00083_#_41 N
ACLA_062510 Aspergillus clavatus CADACLAG00005983 N
CADAFLAG00003614 Aspergillus flavus CADAFLAG00003614 N
AFUA_3G01980 Aspergillus fumigatus CADAFUAG00000223 N
ANIA_00718 Aspergillus nidulans CADANIAG00001950 N
CADANGAG00005038 Aspergillus niger CADANGAG00005038 N
CADANGAG00011548 Aspergillus niger CADANGAG00011548 N
BAUCODRAFT_36555 Baudoinia compniacensis BAUCODRAFT_36555 N
COCC4DRAFT_167760 Bipolaris maydis COCC4DRAFT_167760 N
COCMIDRAFT_94654 Bipolaris oryzae COCMIDRAFT_94654 N
COCSADRAFT_122027 Bipolaris sorokiniana COCSADRAFT_122027 N
COCVIDRAFT_104890 Bipolaris victoriae COCVIDRAFT_104890 N
COCCADRAFT_90843 Bipolaris zeicola COCCADRAFT_90843 N
estExt_Genewise1Plus.C_140579 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_140579 N
DOTSEDRAFT_131743 Dothistroma septosporum DOTSEDRAFT_131743 N
gw1.3.1196.1 Mycosphaerella graminicola gw1.3.1196.1 N
NFIA_003050 Neosartorya fischeri CADNFIAG00000049 N
Pc21g23810 Penicillium chrysogenum Pc21g23810 N
Pc23g00600 Penicillium chrysogenum Pc23g00600 N
PDE_04626 Penicillium oxalicum PDE_04626 N
PCH_Pc21g23810 Penicillium rubens PCH_Pc21g23810 N
PCH_Pc23g00600 Penicillium rubens PCH_Pc23g00600 N
U727_0043182001 Penicillium solitum U727_0043182001 N
MYCFIDRAFT_203102 Pseudocercospora fijiensis MYCFIDRAFT_203102 N
PTRG_02939 Pyrenophora triticirepentis PTRG_02939 N
SEPMUDRAFT_148614 Sphaerulina musiva SEPMUDRAFT_148614 N
Mycgr3G21552 Zymoseptoria tritici Mycgr3G21552 N