Cagra.0084s0008 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0084s0008 T285932_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.690 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0084s0008.1.p Myb 13 60
Cagra.0084s0008.1.p Myb 66 111

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.696
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.690
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.699
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.673
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.673
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.683
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.692
AtMYB82 Arabidopsis lyrata Al_scaffold_0008_1642 I 0.888
Bo1g138250 Brassica oleracea Bo1g138250 I 0.661
Bo2g047590 Brassica oleracea Bo2g047590 I 0.890
Bo3g023140 Brassica oleracea Bo3g023140 I 0.839
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.684
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I 0.904
Bra022602 Brassica rapa Bra022602 I 0.880
Bra029113 Brassica rapa Bra029113 I 0.839
Bra039395 Brassica rapa Bra039395 I 0.664
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.684
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.684
Carubv10028642m.g Capsella rubella Carubv10028642m.g I 0.909
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.677
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.743
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.838
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.661
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.668
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.670
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.675
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.669
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.675
Ca_01329 Cicer arietinum Ca_01329 I 0.704
Ca_17627 Cicer arietinum Ca_17627 I 0.670
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.699
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.675
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.673
Cla016951 Citrullus lanatus Cla016951 I 0.835
Cucsa.132300 Cucumis sativus Cucsa.132300 N 0.811
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.685
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.685
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.675
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.666
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.688
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.668
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.879
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.677
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.694
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.664
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.673
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.671
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.710
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.666
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.849
e_gw1.61.201.1 Physcomitrella patens e_gw1.61.201.1 I 0.661
F775_26191 Aegilops tauschii F775_26191 I 0.666
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.661
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.691
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.673
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.846
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.684
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.739
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.662
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.675
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.683
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.675
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.684
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.683
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.731
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.691
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.718
Gorai.001G044000 Gossypium raimondii Gorai.001G044000 I 0.858
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.661
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.694
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N 0.832
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.675
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.675
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.673
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.666
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.705
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.696
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.662
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.699
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.696
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.699
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.682
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.703
MDP0000031172 Malus domestica MDP0000031172 I 0.663
MDP0000167314 Malus domestica MDP0000167314 I 0.828
MDP0000210851 Malus domestica MDP0000210851 I 0.663
MDP0000264051 Malus domestica MDP0000264051 I 0.850
MDP0000655330 Malus domestica MDP0000655330 I 0.675
MDP0000723614 Malus domestica MDP0000723614 I 0.675
MDP0000791870 Malus domestica MDP0000791870 I 0.666
MDP0000915330 Malus domestica MDP0000915330 I 0.673
mgf023205m Mimulus guttatus mgf023205m I 0.781
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.669
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.687
MYB82 Arabidopsis thaliana AT5G52600 I 0.909
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.685
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.675
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.673
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.709
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.705
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.675
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.703
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I 0.788
PK01088.1 Cannabis sativa PK01088.1 I 0.832
PK14784.1 Cannabis sativa PK14784.1 I 0.673
PK16315.1 Cannabis sativa PK16315.1 I 0.673
Pm005570 Prunus mume Pm005570 I 0.663
Pm005572 Prunus mume Pm005572 I 0.667
Pm018338 Prunus mume Pm018338 I 0.670
Pm027047 Prunus mume Pm027047 I 0.669
Pm027586 Prunus mume Pm027586 I 0.846
Pm029489 Prunus mume Pm029489 I 0.708
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.698
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.666
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N 0.795
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.724
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.663
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.666
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.699
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.695
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.714
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.683
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.689
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N 0.807
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.675
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.670
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I 0.835
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.707
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.663
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.667
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.669
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.690
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.698
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.695
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N 0.782
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.666
SapurV1A.0197s0090 Salix purpurea SapurV1A.0197s0090 N 0.762
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.671
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.671
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.726
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.663
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.675
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.699
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N 0.762
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.670
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.683
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.683
Si038905m.g Setaria italica Si038905m.g I 0.670
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.676
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I 0.788
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.679
TCM_004509 Theobroma cacao TCM_004509 I 0.666
TCM_024180 Theobroma cacao TCM_024180 I 0.675
TCM_025910 Theobroma cacao TCM_025910 I 0.675
TCM_037376 Theobroma cacao TCM_037376 I 0.666
TCM_037377 Theobroma cacao TCM_037377 I 0.697
TCM_037379 Theobroma cacao TCM_037379 I 0.678
TCM_037555 Theobroma cacao TCM_037555 I 0.666
TCM_037559 Theobroma cacao TCM_037559 I 0.663
TCM_038131 Theobroma cacao TCM_038131 I 0.847
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I 0.883
TT2 Arabidopsis thaliana AT5G35550 I 0.684
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.684
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.666
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.668
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.685
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.711
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.663
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.677
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.750
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.688
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.692