CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10022245m.g
(
Capsella rubella
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Carubv10022245m.g
T286415_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10022245m
Myb
10
48
KGAWTAEEDALLKQCIDKYGEGKWHQVPLRAGKLSTDEV
Carubv10022245m
Myb
40
85
AGKLSTDEVDLLIRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Capsella rubella
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_14128
Aegilops tauschii
F775_14128
N
F775_20262
Aegilops tauschii
F775_20262
N
MLOC_66753
Hordeum vulgare
MLOC_66753
N
Pavir.Aa01714
Panicum virgatum
Pavir.Aa01714
N
Si016260m.g
Setaria italica
Si016260m.g
N
Sb02g034880
Sorghum bicolor
Sb02g034880
N
Traes_6AL_1EDDDC063
Triticum aestivum
Traes_6AL_1EDDDC063
N
Traes_6BL_9DC9A9192
Triticum aestivum
Traes_6BL_9DC9A9192
N
Traes_6DL_865644EC4
Triticum aestivum
Traes_6DL_865644EC4
N
Traes_7AS_EC75E7941
Triticum aestivum
Traes_7AS_EC75E7941
N
Traes_7BS_08603B02C
Triticum aestivum
Traes_7BS_08603B02C
N
TRIUR3_25068
Triticum urartu
TRIUR3_25068
N
TRIUR3_28872
Triticum urartu
TRIUR3_28872
N
GRMZM2G059167
Zea mays
GRMZM2G059167
N
GRMZM2G119133
Zea mays
GRMZM2G119133
N