CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10015266m.g
(
Citrus clementina
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ciclev10015266m.g
T286569_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN
NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.888
0.957
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.668
0.851
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10015266m
Myb
171
221
KVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYR
Ciclev10015446m
Myb
171
221
KVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Citrus clementina
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003131
Ricinus communis
29983.m003131
I
0.909
AMTR_s00058p00133630
Amborella trichopoda
AMTR_s00058p00133630
I
0.909
APRR2
Arabidopsis thaliana
AT4G18020
D
0.668
APRR2
Arabidopsis lyrata
fgenesh2_kg.7__2503__AT4G18020.2
I
0.668
Aquca_044_00072
Aquilegia coerulea
Aquca_044_00072
I
0.716
Aquca_051_00026
Aquilegia coerulea
Aquca_051_00026
I
0.820
BGIOSGA002040
Oryza indica
BGIOSGA002040
I
0.787
BGIOSGA022875
Oryza indica
BGIOSGA022875
I
0.790
Bo7g003410
Brassica oleracea
Bo7g003410
I
0.784
Bo7g067200
Brassica oleracea
Bo7g067200
I
0.709
Bo8g102300
Brassica oleracea
Bo8g102300
I
0.784
Bostr.3148s0040
Boechera stricta
Bostr.3148s0040
I
0.771
Bostr.7903s0106
Boechera stricta
Bostr.7903s0106
I
0.888
Bra031129
Brassica rapa
Bra031129
I
0.784
Bra033726
Brassica rapa
Bra033726
I
0.709
Bra036015
Brassica rapa
Bra036015
I
0.682
Bra036482
Brassica rapa
Bra036482
I
0.724
BRADI1G43710
Brachypodium distachyon
BRADI1G43710
I
0.790
BRADI2G08287
Brachypodium distachyon
BRADI2G08287
I
0.808
Cagra.0381s0008
Capsella grandiflora
Cagra.0381s0008
I
0.771
Cagra.2516s0014
Capsella grandiflora
Cagra.2516s0014
I
0.888
Carubv10014114m.g
Capsella rubella
Carubv10014114m.g
I
0.888
Carubv10026528m.g
Capsella rubella
Carubv10026528m.g
I
0.771
cassava43649.valid.m1
Manihot esculenta
cassava43649.valid.m1
I
0.909
cassava43650.valid.m1
Manihot esculenta
cassava43650.valid.m1
I
0.909
cassava9823.m1
Manihot esculenta
cassava9823.m1
I
0.894
Ca_02452
Cicer arietinum
Ca_02452
I
0.891
Ca_11268
Cicer arietinum
Ca_11268
I
0.891
chr3.CM0160.680.nd
Lotus japonicus
chr3.CM0160.680.nd
I
0.870
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.667
Ciclev10031120m.g
Citrus clementina
Ciclev10031120m.g
I
0.675
Cla003791
Citrullus lanatus
Cla003791
I
0.888
Cla008926
Citrullus lanatus
Cla008926
I
0.678
Cucsa.087530
Cucumis sativus
Cucsa.087530
I
0.888
Cucsa.321580
Cucumis sativus
Cucsa.321580
I
0.678
estExt_gwp_gw1.C_310256
Physcomitrella patens
estExt_gwp_gw1.C_310256
I
0.798
Eucgr.A01857
Eucalyptus grandis
Eucgr.A01857
I
0.820
Eucgr.E00308
Eucalyptus grandis
Eucgr.E00308
I
0.667
Eucgr.K01056
Eucalyptus grandis
Eucgr.K01056
I
0.847
F775_20285
Aegilops tauschii
F775_20285
I
0.790
fgenesh1_pm.scaffold_311000005
Physcomitrella patens
fgenesh1_pm.scaffold_311000005
I
0.798
fgenesh2_kg.8__391__AT5G44190.1
Arabidopsis lyrata
fgenesh2_kg.8__391__AT5G44190.1
I
0.771
gene10484-v1.0-hybrid
Fragaria vesca
gene10484-v1.0-hybrid
I
0.675
gene17750-v1.0-hybrid
Fragaria vesca
gene17750-v1.0-hybrid
I
0.909
GLK1
Oryza sativa
OS06G0348800
I
0.790
GLK2
Arabidopsis thaliana
AT5G44190
I
0.771
GLK2
Oryza sativa
OS01G0239000
I
0.820
GLYMA06G44330
Glycine max
GLYMA06G44330
I
0.891
GLYMA12G13430
Glycine max
GLYMA12G13430
I
0.891
GLYMA12G33430
Glycine max
GLYMA12G33430
I
0.891
GLYMA13G37010
Glycine max
GLYMA13G37010
I
0.891
Gorai.002G020300
Gossypium raimondii
Gorai.002G020300
I
0.909
Gorai.008G155000
Gossypium raimondii
Gorai.008G155000
I
0.820
Gorai.012G126600
Gossypium raimondii
Gorai.012G126600
I
0.909
GPRI1
Arabidopsis thaliana
AT2G20570
D
0.888
GPRI1
Arabidopsis lyrata
fgenesh2_kg.3__3588__AT2G20570.1
I
0.888
GPRI1
Vitis vinifera
VIT_12s0028g03100
I
0.891
GRMZM2G026833
Zea mays
GRMZM2G026833
I
0.730
GRMZM2G087804
Zea mays
GRMZM2G087804
I
0.802
GSMUA_Achr10G26160_001
Musa acuminata
GSMUA_Achr10G26160_001
I
0.820
GSMUA_Achr2G15250_001
Musa acuminata
GSMUA_Achr2G15250_001
I
0.799
GSMUA_Achr6G05850_001
Musa acuminata
GSMUA_Achr6G05850_001
I
0.789
GSMUA_Achr7G11040_001
Musa acuminata
GSMUA_Achr7G11040_001
I
0.820
LPERR01G08320
Leersia perrieri
LPERR01G08320
I
0.820
LPERR06G12880
Leersia perrieri
LPERR06G12880
I
0.790
Lus10018649.g
Linum usitatissimum
Lus10018649.g
I
0.888
Lus10033642.g
Linum usitatissimum
Lus10033642.g
I
0.888
Lus10039883.g
Linum usitatissimum
Lus10039883.g
I
0.888
Lus10040109.g
Linum usitatissimum
Lus10040109.g
I
0.679
MDP0000225179
Malus domestica
MDP0000225179
I
0.909
MDP0000237396
Malus domestica
MDP0000237396
I
0.661
MDP0000526864
Malus domestica
MDP0000526864
I
0.909
mgf004257m
Mimulus guttatus
mgf004257m
I
0.888
mgf007181m
Mimulus guttatus
mgf007181m
I
0.842
mgf012846m
Mimulus guttatus
mgf012846m
I
0.842
mgf014879m
Mimulus guttatus
mgf014879m
I
0.814
MLOC_43537
Hordeum vulgare
MLOC_43537
I
0.790
MLOC_65876
Hordeum vulgare
MLOC_65876
I
0.787
MTR_2g090675
Medicago truncatula
MTR_2g090675
I
0.891
MTR_4g078810
Medicago truncatula
MTR_4g078810
I
0.880
OB01G18980
Oryza brachyantha
OB01G18980
I
0.767
OB06G22250
Oryza brachyantha
OB06G22250
I
0.790
OBART03G02540
Oryza barthii
OBART03G02540
I
0.790
OGLUM01G10130
Oryza glumaepatula
OGLUM01G10130
I
0.820
OGLUM06G15080
Oryza glumaepatula
OGLUM06G15080
I
0.790
OMERI01G08840
Oryza meridionalis
OMERI01G08840
I
0.820
OMERI06G15340
Oryza meridionalis
OMERI06G15340
I
0.790
ONIVA01G11450
Oryza nivara
ONIVA01G11450
I
0.820
ONIVA06G16920
Oryza nivara
ONIVA06G16920
I
0.790
OPUNC01G08680
Oryza punctata
OPUNC01G08680
I
0.820
OPUNC06G13180
Oryza punctata
OPUNC06G13180
I
0.790
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.667
orange1.1g008254m.g
Citrus sinensis
orange1.1g008254m.g
I
0.675
orange1.1g013528m.g
Citrus sinensis
orange1.1g013528m.g
I
0.909
ORGLA01G0079000
Oryza glaberrima
ORGLA01G0079000
I
0.787
ORGLA06G0126200
Oryza glaberrima
ORGLA06G0126200
I
0.790
ORUFI01G09620
Oryza rufipogon
ORUFI01G09620
I
0.820
ORUFI06G15000
Oryza rufipogon
ORUFI06G15000
I
0.790
Pavir.Db01285
Panicum virgatum
Pavir.Db01285
I
0.790
Pavir.Ea00014
Panicum virgatum
Pavir.Ea00014
I
0.794
Pavir.Eb00063
Panicum virgatum
Pavir.Eb00063
I
0.802
Pavir.J11422
Panicum virgatum
Pavir.J11422
I
0.737
PDK_20s1585631g001
Phoenix dactylifera
PDK_20s1585631g001
I
0.742
PDK_20s1662851g001
Phoenix dactylifera
PDK_20s1662851g001
I
0.835
PGSC0003DMG400009378
Solanum tuberosum
PGSC0003DMG400009378
I
0.891
PGSC0003DMG400021857
Solanum tuberosum
PGSC0003DMG400021857
I
0.728
PK19826.1
Cannabis sativa
PK19826.1
I
0.675
PK27491.1
Cannabis sativa
PK27491.1
I
0.909
Pm014123
Prunus mume
Pm014123
I
0.909
Pm014733
Prunus mume
Pm014733
I
0.675
POPTR_0007s01230
Populus trichocarpa
POPTR_0007s01230
I
0.909
POPTR_0017s04720
Populus trichocarpa
POPTR_0017s04720
I
0.909
PRUPE_ppa004161mg
Prunus persica
PRUPE_ppa004161mg
I
0.675
PRUPE_ppa014599mg
Prunus persica
PRUPE_ppa014599mg
I
0.909
SapurV1A.0118s0260
Salix purpurea
SapurV1A.0118s0260
I
0.909
SapurV1A.0693s0070
Salix purpurea
SapurV1A.0693s0070
I
0.909
SapurV1A.1950s0030
Salix purpurea
SapurV1A.1950s0030
I
0.909
Sb03g000400
Sorghum bicolor
Sb03g000400
I
0.802
Sb10g008400
Sorghum bicolor
Sb10g008400
I
0.790
SELMODRAFT_428906
Selaginella moellendorffii
SELMODRAFT_428906
I
0.728
Si001336m.g
Setaria italica
Si001336m.g
I
0.790
Si006400m.g
Setaria italica
Si006400m.g
I
0.790
Solyc07g053630.2
Solanum lycopersicum
Solyc07g053630.2
I
0.891
TCM_008193
Theobroma cacao
TCM_008193
I
0.909
TCM_015780
Theobroma cacao
TCM_015780
I
0.675
Thhalv10001986m.g
Eutrema salsugineum
Thhalv10001986m.g
I
0.839
Thhalv10003223m.g
Eutrema salsugineum
Thhalv10003223m.g
I
0.771
TRAES3BF062500050CFD_g
Triticum aestivum
TRAES3BF062500050CFD_g
I
0.808
Traes_7DL_58DDB90E3
Triticum aestivum
Traes_7DL_58DDB90E3
I
0.790
TRIUR3_15856
Triticum urartu
TRIUR3_15856
I
0.737