Eucgr.C00947 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00947 T286792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.661 0.710
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00947.1 Myb 14 62
Eucgr.C00947.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I 0.715
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.709
SapurV1A.0608s0210 Salix purpurea SapurV1A.0608s0210 I 0.706
MDP0000124992 Malus domestica MDP0000124992 I 0.702
MDP0000262514 Malus domestica MDP0000262514 I 0.702
MDP0000786507 Malus domestica MDP0000786507 I 0.702
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.699
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.696
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.696
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.694
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I 0.694
TCM_037245 Theobroma cacao TCM_037245 I 0.694
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.694
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.693
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.691
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.691
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.691
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.691
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.691
Cla014272 Citrullus lanatus Cla014272 I 0.691
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.691
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.691
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.691
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.691
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.691
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.691
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.691
PK02305.1 Cannabis sativa PK02305.1 I 0.691
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.685
BRADI1G07260 Brachypodium distachyon BRADI1G07260 I 0.685
GSMUA_Achr4G01050_001 Musa acuminata GSMUA_Achr4G01050_001 I 0.685
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.685
OBART03G35660 Oryza barthii OBART03G35660 I 0.685
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.685
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.685
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.685
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.685
OPUNC03G32690 Oryza punctata OPUNC03G32690 I 0.685
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.685
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.685
OS03G0771100 Oryza sativa OS03G0771100 I 0.685
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.685
Si036681m.g Setaria italica Si036681m.g I 0.685
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.685
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.685
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.683
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.683
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.683
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.682
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.682
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.682
OB03G42660 Oryza brachyantha OB03G42660 I 0.682
TCM_034634 Theobroma cacao TCM_034634 I 0.682
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.682
Ca_09203 Cicer arietinum Ca_09203 I 0.682
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.682
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.682
GLYMA07G15250 Glycine max GLYMA07G15250 I 0.681
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.681
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I 0.680
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I 0.680
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.679
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.679
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.679
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.679
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.678
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.678
GSMUA_Achr1G04910_001 Musa acuminata GSMUA_Achr1G04910_001 I 0.678
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I 0.678
gene02652-v1.0-hybrid Fragaria vesca gene02652-v1.0-hybrid I 0.678
PK14382.1 Cannabis sativa PK14382.1 I 0.678
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.676
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.675
Eucgr.I00663 Eucalyptus grandis Eucgr.I00663 I 0.675
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.674
cassava16944.m1 Manihot esculenta cassava16944.m1 I 0.674
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I 0.674
Ca_02249 Cicer arietinum Ca_02249 I 0.673
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.673
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I 0.673
GLYMA01G00805 Glycine max GLYMA01G00805 I 0.672
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.672
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I 0.672
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.672
OB01G36020 Oryza brachyantha OB01G36020 I 0.669
OB05G32650 Oryza brachyantha OB05G32650 I 0.669
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N 0.669
GRMZM2G104789 Zea mays GRMZM2G104789 I 0.668
mgf002711m Mimulus guttatus mgf002711m I 0.668
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I 0.668
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I 0.668
MTR_1g017000 Medicago truncatula MTR_1g017000 I 0.667
Solyc12g008670.1 Solanum lycopersicum Solyc12g008670.1 I 0.667
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.666
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.666
Sb03g003120 Sorghum bicolor Sb03g003120 N 0.666
Cla021213 Citrullus lanatus Cla021213 I 0.666
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.666
Si002629m.g Setaria italica Si002629m.g N 0.665
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.665
Lus10039646.g Linum usitatissimum Lus10039646.g I 0.665
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N 0.665
AMTR_s00019p00201260 Amborella trichopoda AMTR_s00019p00201260 I 0.664
TCM_038898 Theobroma cacao TCM_038898 I 0.664
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.664
Pavir.J07059 Panicum virgatum Pavir.J07059 I 0.664
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.663
GRMZM2G001875 Zea mays GRMZM2G001875 N 0.663
OB08G17260 Oryza brachyantha OB08G17260 I 0.663
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.663
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.663
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.663
F775_08680 Aegilops tauschii F775_08680 I 0.662
MLOC_52896 Hordeum vulgare MLOC_52896 I 0.662
Traes_5AL_8008803A5 Triticum aestivum Traes_5AL_8008803A5 I 0.662
Traes_5BL_A848F629F Triticum aestivum Traes_5BL_A848F629F I 0.662
Traes_5DL_1521D205A Triticum aestivum Traes_5DL_1521D205A I 0.662
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I 0.662
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.661
AMTR_s00044p00189590 Amborella trichopoda AMTR_s00044p00189590 I 0.661
RAX3 Arabidopsis thaliana AT3G49690 D 0.661
Bo8g078940 Brassica oleracea Bo8g078940 I 0.661
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.661
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.661
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.661
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.661
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.661
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I 0.661
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.661
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I 0.661
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I 0.661
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.661
Ca_03266 Cicer arietinum Ca_03266 I 0.661
Cla019089 Citrullus lanatus Cla019089 I 0.661
Pm008668 Prunus mume Pm008668 I 0.661
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.661
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.661
Cucsa.092250 Cucumis sativus Cucsa.092250 I 0.661
mgf024894m Mimulus guttatus mgf024894m I 0.661
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.661
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.661
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.661
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.661
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.661
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.661
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.661
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.661
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I 0.661
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.661
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.661
MDP0000809452 Malus domestica MDP0000809452 I 0.661
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.661
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.661
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.661