Eucgr.F02372 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.F02372 T286859_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.717 0.774
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.692 0.774
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.692 0.774
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.692 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.691 0.720
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.682 0.774
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.682 0.763
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.682 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02372.1 Myb 41 87
Eucgr.F02372.1 Myb 93 138

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.832
Cla021015 Citrullus lanatus Cla021015 I 0.825
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.824
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.817
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.801
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.800
Pm005220 Prunus mume Pm005220 I 0.800
MDP0000894463 Malus domestica MDP0000894463 I 0.800
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.798
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.786
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.784
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.784
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.784
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.781
30170.m013927 Ricinus communis 30170.m013927 I 0.775
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.775
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.775
MDP0000477900 Malus domestica MDP0000477900 I 0.773
MDP0000480596 Malus domestica MDP0000480596 I 0.773
MDP0000641708 Malus domestica MDP0000641708 I 0.773
MDP0000784297 Malus domestica MDP0000784297 I 0.773
MDP0000823270 Malus domestica MDP0000823270 I 0.773
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.766
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.766
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.766
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.764
mgf006151m Mimulus guttatus mgf006151m I 0.759
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.745
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.742
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.742
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.742
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.742
Ca_01522 Cicer arietinum Ca_01522 I 0.742
mgf020432m Mimulus guttatus mgf020432m I 0.733
mgf023922m Mimulus guttatus mgf023922m I 0.732
Cla022889 Citrullus lanatus Cla022889 I 0.731
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.731
TCM_033907 Theobroma cacao TCM_033907 I 0.727
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.725
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.723
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.722
Cla022947 Citrullus lanatus Cla022947 I 0.722
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.722
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.719
GLYMA17G36370 Glycine max GLYMA17G36370 I 0.718
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.718
mgf003084m Mimulus guttatus mgf003084m I 0.718
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.718
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.717
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.717
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.717
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.717
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.717
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.717
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.717
OS02G0187700 Oryza sativa OS02G0187700 D 0.717
Bo4g025810 Brassica oleracea Bo4g025810 I 0.714
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.714
MYB109 Arabidopsis thaliana AT3G55730 I 0.713
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.713
PK29071.1 Cannabis sativa PK29071.1 I 0.713
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.712
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.712
Bra005006 Brassica rapa Bra005006 I 0.709
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.706
29814.m000736 Ricinus communis 29814.m000736 I 0.706
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.706
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.706
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.706
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.705
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.704
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.704
Bra007186 Brassica rapa Bra007186 I 0.703
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.703
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.701
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.701
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.701
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.701
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.701
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.701
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.701
Bra001323 Brassica rapa Bra001323 I 0.700
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.700
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.700
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.700
Si017917m.g Setaria italica Si017917m.g I 0.700
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.700
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.700
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.700
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.700
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.699
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.698
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.697
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.697
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.697
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.697
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.697
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.697
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.696
TCM_007138 Theobroma cacao TCM_007138 I 0.696
mgf002573m Mimulus guttatus mgf002573m I 0.696
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.696
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.695
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.695
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.695
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.695
Bo8g090160 Brassica oleracea Bo8g090160 I 0.694
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.694
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.694
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.693
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.693
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.693
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.693
MYB44 Arabidopsis thaliana AT5G67300 D 0.692
Bo2g167960 Brassica oleracea Bo2g167960 I 0.692
Bo7g063830 Brassica oleracea Bo7g063830 I 0.692
Bra012149 Brassica rapa Bra012149 I 0.692
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.692
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.692
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.692
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.692
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.692
MYB1 Arabidopsis thaliana AT3G09230 D 0.691
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.690
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.690
Cla014191 Citrullus lanatus Cla014191 I 0.689
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.689
MDP0000203733 Malus domestica MDP0000203733 I 0.689
MDP0000319124 Malus domestica MDP0000319124 I 0.689
Cla004431 Citrullus lanatus Cla004431 I 0.688
mgf025567m Mimulus guttatus mgf025567m I 0.688
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.686
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.686
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.685
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.685
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.684
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.684
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.684
MYB25 Arabidopsis thaliana AT2G39880 I 0.683
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.683
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.683
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.682
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.682
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.682
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.682
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.682
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.682
PK28565.1 Cannabis sativa PK28565.1 D 0.682
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.682
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.680
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.680
Si006938m.g Setaria italica Si006938m.g I 0.680
Cla020946 Citrullus lanatus Cla020946 I 0.680
Pm005332 Prunus mume Pm005332 I 0.680
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.680
MDP0000463846 Malus domestica MDP0000463846 I 0.680
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.680
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.680
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.679
OB01G46120 Oryza brachyantha OB01G46120 I 0.679
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.679
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.679
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.678
Bo7g099180 Brassica oleracea Bo7g099180 I 0.677
Bra012910 Brassica rapa Bra012910 I 0.677
TCM_042474 Theobroma cacao TCM_042474 I 0.677
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.676
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.676
MDP0000275800 Malus domestica MDP0000275800 I 0.676
PK01153.1 Cannabis sativa PK01153.1 I 0.676
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.675
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.675
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.675
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.675
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.675
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.675
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.674
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.674
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.674
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.673
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.673
Si032789m.g Setaria italica Si032789m.g I 0.673
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.673
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I 0.673
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.673
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.673
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.673
Ca_12468 Cicer arietinum Ca_12468 I 0.671
30170.m013698 Ricinus communis 30170.m013698 I 0.671
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.671
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.671
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.671
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.671
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.671
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.671
PK17282.1 Cannabis sativa PK17282.1 I 0.671
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.670
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.669
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.669
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.669
OB09G10200 Oryza brachyantha OB09G10200 I 0.669
OBART09G00310 Oryza barthii OBART09G00310 I 0.669
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.669
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.669
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.669
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.669
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.669
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.669
OS09G0106700 Oryza sativa OS09G0106700 I 0.669
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.669
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.669
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.669
Bo1g004900 Brassica oleracea Bo1g004900 I 0.668
Bra011749 Brassica rapa Bra011749 I 0.668
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.667
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.666
Bo7g117880 Brassica oleracea Bo7g117880 I 0.665
Bra034057 Brassica rapa Bra034057 I 0.665
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.665
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.665
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.665
TCM_021796 Theobroma cacao TCM_021796 I 0.665
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.665
Ca_02182 Cicer arietinum Ca_02182 I 0.665
Cla018417 Citrullus lanatus Cla018417 I 0.665
27798.m000612 Ricinus communis 27798.m000612 I 0.665
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.665
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.665
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.665
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.665
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.665
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.665
MDP0000196986 Malus domestica MDP0000196986 I 0.665
MDP0000232454 Malus domestica MDP0000232454 I 0.665
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.664
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.664
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.664
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.664
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.664
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.663
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.662
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.662
MDP0000478512 Malus domestica MDP0000478512 I 0.662