CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.contig_42663.2
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.contig_42663.2
T287022_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.703
0.795
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_42663.2
Myb
9
56
KGAWTAEEDDRLRKCVEKYGEGKWHRVPFAAGLNRCRKSCRLRWLNYL
evm.TU.contig_42663.2
Myb
62
102
REKFTVDEVDLMMRMHKLLGNRWSLIAGRLPGRTANDIKNY
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_05704
Exophiala aquamarina
A1O9_05704
N
ACOM029353
Anopheles coluzzii
ACOM029353
I
ACRE_043870
Acremonium chrysogenum
ACRE_043870
N
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
AMEC000538
Anopheles melas
AMEC000538
I
AMEM007694
Anopheles merus
AMEM007694
N
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
BOTBODRAFT_575781
Botryobasidium botryosum
BOTBODRAFT_575781
N
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
CAA46605
Xenopus laevis
CAA46605
N
CAA46607
Xenopus laevis
CAA46607
N
CC1G_05598
Coprinopsis cinerea
CC1G_05598
N
csin108932
Clonorchis sinensis
csin108932
I
D915_01276
Fasciola hepatica
D915_01276
N
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
SOX8
Equus caballus
ENSECAG00000016320
I
SOX2
Felis catus
ENSFCAG00000029205
I
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
ENSP00000322568
Macaca fascicularis
ENSP00000322568
I
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
SOX2
Procavia capensis
ENSPCAG00000003690
I
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
GL15054
Drosophila persimilis
FBgn0152658
N
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
GPLIN_000596700
Globodera pallida
GPLIN_000596700
I
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
gw.110.115.1
Branchiostoma floridae
gw.110.115.1
N
GYMLUDRAFT_143012
Gymnopus luxurians
GYMLUDRAFT_143012
N
H072_9933
Dactylellina haptotyla
H072_9933
N
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
HMEL002398
Heliconius melpomene
HMEL002398
I
HMEL006651
Heliconius melpomene
HMEL006651
I
HYDPIDRAFT_51400
Hydnomerulius pinastri
HYDPIDRAFT_51400
N
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
maker-nMf.1.1.scaf00287-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf00287-augustus-gene-0.13
I
MAM_00948
Metarhizium album
MAM_00948
N
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
MESCA006188
Megaselia scalaris
MESCA006188
N
MESCA006364
Megaselia scalaris
MESCA006364
N
MESCA012239
Megaselia scalaris
MESCA012239
I
Mycgr3G33619
Zymoseptoria tritici
Mycgr3G33619
N
MYCTH_2070581
Myceliophthora thermophila
MYCTH_2070581
N
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
Ogr08337
Ophisaurus gracilis
Ogr08337
N
PDIP_33190
Penicillium digitatum
PDIP_33190
N
PEX1_064750
Penicillium expansum
PEX1_064750
N
PFICI_02946
Pestalotiopsis fici
PFICI_02946
N
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
POSPLDRAFT_104634
Postia placenta
POSPLDRAFT_104634
N
PPAI003639
Phlebotomus papatasi
PPAI003639
N
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
PTTG_00444
Puccinia triticina
PTTG_00444
N
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
RPRC001038
Rhodnius prolixus
RPRC001038
N
RPRC013413
Rhodnius prolixus
RPRC013413
N
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
SMU15030186
Schmidtea mediterranea
SMU15030186
N
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
T265_14506
Opisthorchis viverrini
T265_14506
I
Thaps7519
Thalassiosira pseudonana
Thaps7519
N
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
TRIATDRAFT_19824
Trichoderma atroviride
TRIATDRAFT_19824
N
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
UCREL1_469
Eutypa lata
UCREL1_469
N
UCREL1_749
Eutypa lata
UCREL1_749
N
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
sox-2
Caenorhabditis elegans
WBGene00004949
I
sox13.S
Xenopus laevis
XB-GENE-865496
I
sox5.S
Xenopus laevis
XB-GENE-865667
I
XP_002935940
Xenopus tropicalis
XP_002935940
N
YQE_08562
Dendroctonus ponderosae
YQE_08562
N