evm.TU.contig_42663.2 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.contig_42663.2 T287022_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH

DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.703 0.795
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_42663.2 Myb 9 56
evm.TU.contig_42663.2 Myb 62 102

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla023001 Citrullus lanatus Cla023001 N
Cucsa.089670 Cucumis sativus Cucsa.089670 N
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N
GLYMA08G03525 Glycine max GLYMA08G03525 N
GLYMA08G44950 Glycine max GLYMA08G44950 N
GLYMA14G10483 Glycine max GLYMA14G10483 I
GLYMA18G32370 Glycine max GLYMA18G32370 N
GRMZM2G305856 Zea mays GRMZM2G305856 I
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N
LjSGA_067208.1 Lotus japonicus LjSGA_067208.1 N
MDP0000244980 Malus domestica MDP0000244980 N
MDP0000470422 Malus domestica MDP0000470422 N
mgf024109m Mimulus guttatus mgf024109m N
mgf026463m Mimulus guttatus mgf026463m N
MLOC_67874 Hordeum vulgare MLOC_67874 N
MYB21 Arabidopsis thaliana AT3G27810 I
MYB27 Arabidopsis thaliana AT3G53200 D
orange1.1g038824m.g Citrus sinensis orange1.1g038824m.g N
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I
Pavir.Ga02684 Panicum virgatum Pavir.Ga02684 I
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N
Pavir.J36591 Panicum virgatum Pavir.J36591 I
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N
PDK_20s1675721g001 Phoenix dactylifera PDK_20s1675721g001 N
Pm005451 Prunus mume Pm005451 N
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I
Traes_5AL_D1807A4E0 Triticum aestivum Traes_5AL_D1807A4E0 N