CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_34.62
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_34.62
T287134_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_34.62
Myb
14
61
KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYL
evm.model.supercontig_34.62
Myb
67
112
RGNYTKEEEDTILRLHETLGNKWSAIAAHLAGRTDNEIKNHWAHHP
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.783
MDP0000155426
Malus domestica
MDP0000155426
I
0.783
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.783
TCM_007865
Theobroma cacao
TCM_007865
I
0.776
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.770
Pm015302
Prunus mume
Pm015302
N
0.770
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.769
MDP0000407613
Malus domestica
MDP0000407613
N
0.766
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.765
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.765
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.760
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.758
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.758
PK24260.1
Cannabis sativa
PK24260.1
N
0.758
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.742
Lus10039771.g
Linum usitatissimum
Lus10039771.g
N
0.740
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.738
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.727
Lus10039772.g
Linum usitatissimum
Lus10039772.g
N
0.719
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
0.718
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
0.716
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
0.714
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.713
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.709
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.706
Ca_22597
Cicer arietinum
Ca_22597
N
0.706
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.705
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.705
Lus10018546.g
Linum usitatissimum
Lus10018546.g
N
0.704
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.696
Lus10018547.g
Linum usitatissimum
Lus10018547.g
N
0.694
GLYMA12G11390
Glycine max
GLYMA12G11390
N
0.693
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
0.689
MTR_2g089420
Medicago truncatula
MTR_2g089420
N
0.688
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.688
Eucgr.A01767
Eucalyptus grandis
Eucgr.A01767
I
0.688
chr3.LjT47O18.40.nc
Lotus japonicus
chr3.LjT47O18.40.nc
N
0.684
PGSC0003DMG400013752
Solanum tuberosum
PGSC0003DMG400013752
N
0.682
Solyc12g005640.1
Solanum lycopersicum
Solyc12g005640.1
N
0.682
MDP0000131822
Malus domestica
MDP0000131822
I
0.682
MTR_0008s0390
Medicago truncatula
MTR_0008s0390
N
0.681
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
0.681
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
0.681
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
0.681
MTR_0251s0050
Medicago truncatula
MTR_0251s0050
N
0.679
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
0.676
Pm009880
Prunus mume
Pm009880
N
0.675
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.675
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.675
GSMUA_Achr5G14600_001
Musa acuminata
GSMUA_Achr5G14600_001
I
0.673
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.671
GLYMA12G11340
Glycine max
GLYMA12G11340
N
0.671
GLYMA13G37903
Glycine max
GLYMA13G37903
I
0.670
PGSC0003DMG400015087
Solanum tuberosum
PGSC0003DMG400015087
N
0.670
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
0.670
cassava6764.valid.m1
Manihot esculenta
cassava6764.valid.m1
I
0.669
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.669
GLYMA06G45540
Glycine max
GLYMA06G45540
N
0.668
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.667
MDP0000289283
Malus domestica
MDP0000289283
I
0.667
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.664
Lus10022021.g
Linum usitatissimum
Lus10022021.g
I
0.663
MTR_0008s0470
Medicago truncatula
MTR_0008s0470
N
0.661
TCM_030020
Theobroma cacao
TCM_030020
I
0.661