CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_46.32
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_46.32
T287148_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.682
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_46.32
Myb
13
60
RGLWKPEEDLILKNYVETHGEGNWADVSEKSGLMRGGKSCRLRWKNYL
evm.model.supercontig_46.32
Myb
66
111
RGGMSEEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.682
AtMYB82
Arabidopsis lyrata
Al_scaffold_0008_1642
I
0.827
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.699
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.685
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.684
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.669
TT2
Arabidopsis thaliana
AT5G35550
I
0.678
MYB82
Arabidopsis thaliana
AT5G52600
I
0.849
Bo2g047590
Brassica oleracea
Bo2g047590
I
0.861
Bo3g023140
Brassica oleracea
Bo3g023140
I
0.810
Bra022602
Brassica rapa
Bra022602
I
0.850
Bra029113
Brassica rapa
Bra029113
I
0.810
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.678
GLYMA07G05960
Glycine max
GLYMA07G05960
I
0.676
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.724
GLYMA16G02570
Glycine max
GLYMA16G02570
I
0.676
GLYMA19G44660
Glycine max
GLYMA19G44660
I
0.705
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.676
GLYMA20G32510
Glycine max
GLYMA20G32510
I
0.703
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.690
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.699
GSMUA_Achr3G21000_001
Musa acuminata
GSMUA_Achr3G21000_001
I
0.665
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.684
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.698
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.669
MTR_7g117730
Medicago truncatula
MTR_7g117730
I
0.661
PGSC0003DMG400030913
Solanum tuberosum
PGSC0003DMG400030913
I
0.832
POPTR_0002s17460
Populus trichocarpa
POPTR_0002s17460
I
0.690
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.701
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.673
POPTR_0014s09630
Populus trichocarpa
POPTR_0014s09630
I
0.687
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.703
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
0.672
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
0.679
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.662
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.663
PRUPE_ppa016532mg
Prunus persica
PRUPE_ppa016532mg
I
0.841
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
0.698
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.661
SELMODRAFT_127220
Selaginella moellendorffii
SELMODRAFT_127220
I
0.691
SELMODRAFT_98669
Selaginella moellendorffii
SELMODRAFT_98669
I
0.691
Si038905m.g
Setaria italica
Si038905m.g
I
0.668
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.668
Solyc07g008010.2
Solanum lycopersicum
Solyc07g008010.2
I
0.832
TCM_037377
Theobroma cacao
TCM_037377
I
0.675
TCM_037379
Theobroma cacao
TCM_037379
I
0.682
TCM_038131
Theobroma cacao
TCM_038131
I
0.868
VIT_09s0002g01410
Vitis vinifera
VIT_09s0002g01410
I
0.682
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.666
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.668
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.662
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.686
Ca_01329
Cicer arietinum
Ca_01329
I
0.678
Ca_17627
Cicer arietinum
Ca_17627
I
0.662
Cla016951
Citrullus lanatus
Cla016951
I
0.865
Pm005572
Prunus mume
Pm005572
I
0.661
Pm005573
Prunus mume
Pm005573
I
0.663
Pm018338
Prunus mume
Pm018338
I
0.662
Pm027586
Prunus mume
Pm027586
I
0.852
Pm029185
Prunus mume
Pm029185
I
0.663
Pm029489
Prunus mume
Pm029489
I
0.694
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.662
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.735
cassava32672.m1
Manihot esculenta
cassava32672.m1
I
0.866
mgf023205m
Mimulus guttatus
mgf023205m
I
0.812
Aquca_009_00493
Aquilegia coerulea
Aquca_009_00493
I
0.666
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.678
Bostr.7305s0011
Boechera stricta
Bostr.7305s0011
I
0.844
Cagra.0084s0008
Capsella grandiflora
Cagra.0084s0008
I
0.849
Cagra.4961s0006
Capsella grandiflora
Cagra.4961s0006
I
0.662
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.678
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.678
Carubv10018791m.g
Capsella rubella
Carubv10018791m.g
I
0.662
Carubv10028642m.g
Capsella rubella
Carubv10028642m.g
I
0.849
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.665
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.702
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.674
Eucgr.C01374
Eucalyptus grandis
Eucgr.C01374
I
0.853
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.679
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.665
Eucgr.E01031
Eucalyptus grandis
Eucgr.E01031
I
0.662
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.689
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.667
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.665
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.685
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.665
gene31098-v1.0-hybrid
Fragaria vesca
gene31098-v1.0-hybrid
I
0.863
Gorai.001G044000
Gossypium raimondii
Gorai.001G044000
I
0.879
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.703
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.665
Lus10013762.g
Linum usitatissimum
Lus10013762.g
I
0.673
Lus10039173.g
Linum usitatissimum
Lus10039173.g
I
0.677
MDP0000167314
Malus domestica
MDP0000167314
I
0.831
MDP0000209761
Malus domestica
MDP0000209761
I
0.667
MDP0000264051
Malus domestica
MDP0000264051
I
0.844
MDP0000915330
Malus domestica
MDP0000915330
I
0.665
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.665
SapurV1A.0003s0900
Salix purpurea
SapurV1A.0003s0900
I
0.690
SapurV1A.0013s0160
Salix purpurea
SapurV1A.0013s0160
I
0.687
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.703
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.673
Thhalv10014754m.g
Eutrema salsugineum
Thhalv10014754m.g
I
0.853
PK01088.1
Cannabis sativa
PK01088.1
I
0.851
PK05970.1
Cannabis sativa
PK05970.1
I
0.673
PK14784.1
Cannabis sativa
PK14784.1
I
0.665
chr1.CM0105.50.nd
Lotus japonicus
chr1.CM0105.50.nd
I
0.673
LjSGA_023691.1
Lotus japonicus
LjSGA_023691.1
I
0.673
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
0.700
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.690
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.705
POPTR_0006s06530
Populus trichocarpa
POPTR_0006s06530
N
0.816
POPTR_0018s12780
Populus trichocarpa
POPTR_0018s12780
N
0.846
VIT_11s0016g05660
Vitis vinifera
VIT_11s0016g05660
N
0.749
VIT_11s0016g05690
Vitis vinifera
VIT_11s0016g05690
N
0.713
Cucsa.132300
Cucumis sativus
Cucsa.132300
N
0.842
Gorai.004G276500
Gossypium raimondii
Gorai.004G276500
N
0.836
SapurV1A.0034s0330
Salix purpurea
SapurV1A.0034s0330
N
0.821
SapurV1A.0197s0090
Salix purpurea
SapurV1A.0197s0090
N
0.783
SapurV1A.2191s0020
Salix purpurea
SapurV1A.2191s0020
N
0.783