CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_46.32
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_46.32
T287148_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.682
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_46.32
Myb
13
60
RGLWKPEEDLILKNYVETHGEGNWADVSEKSGLMRGGKSCRLRWKNYL
evm.model.supercontig_46.32
Myb
66
111
RGGMSEEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013374
Aedes aegypti
AAEL013374
N
ANCCAN_18840
Ancylostoma caninum
ANCCAN_18840
N
ANCDUO_15583
Ancylostoma duodenale
ANCDUO_15583
N
AEPI009424
Anopheles epiroticus
AEPI009424
N
BGLB008222
Biomphalaria glabrata
BGLB008222
N
BGIBMGA001408
Bombyx mori
BGIBMGA001408
N
BTMF_0001429901
Brugia timori
BTMF_0001429901
N
BXY_1035000
Bursaphelenchus xylophilus
BXY_1035000
N
BXY_1034900
Bursaphelenchus xylophilus
BXY_1034900
I
CapteG78125
Capitella teleta
CapteG78125
N
CLEC006296
Cimex lectularius
CLEC006296
N
KGM_20032
Danaus plexippus
KGM_20032
N
GF17143
Drosophila ananassae
FBgn0094162
N
GF17175
Drosophila ananassae
FBgn0094193
N
GH12158
Drosophila grimshawi
FBgn0119637
N
GI10902
Drosophila mojavensis
FBgn0133665
N
GJ18548
Drosophila virilis
FBgn0205706
N
HCOI00051800
Haemonchus contortus
HCOI00051800
N
HHAL001513-PA
Halyomorpha halys
HHAL001513-PA
N
HMEL014400
Heliconius melpomene
HMEL014400
N
HPBE_0000946001
Heligmosomoides bakeri
HPBE_0000946001
N
Hba_07323
Heterorhabditis bacteriophora
Hba_07323
N
ISCW018372
Ixodes scapularis
ISCW018372
N
LCUP009247
Lucilia cuprina
LCUP009247
N
MCINX008008
Melitaea cinxia
MCINX008008
N
Minc05254
Meloidogyne incognita
Minc05254
N
MDOA010514
Musca domestica
MDOA010514
N
NECAME_09957
Necator americanus
NECAME_09957
N
PTRK_0001274900
Parastrongyloides trichosuri
PTRK_0001274900
N
RPRC004296
Rhodnius prolixus
RPRC004296
N
nRc.2.0.1.g39124
Romanomermis culicivorax
nRc.2.0.1.g39124
N
L893_g32898
Steinernema glaseri
L893_g32898
N
SVUK_0000102101
Strongylus vulgaris
SVUK_0000102101
N
TC001693
Tribolium castaneum
TC001693
N
D917_04255
Trichinella nativa
D917_04255
N
EFV52039
Trichinella spiralis
EFV52039
N
D918_00954
Trichuris suis
D918_00954
N
TTRE_0000574401
Trichuris trichiura
TTRE_0000574401
N