gene01998-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene01998-v1.0-hybrid T287224_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01998.1-v1.0-hybrid Myb 14 61
mrna01998.1-v1.0-hybrid Myb 67 112

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK24260.1 Cannabis sativa PK24260.1 N 0.784
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.665
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.727
Ca_22597 Cicer arietinum Ca_22597 N 0.780
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.674
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.711
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.687
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.667
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.693
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.708
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.673
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.688
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.689
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.713
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.683
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.718
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.771
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.766
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.713
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.696
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.724
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.738
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.684
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.689
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.743
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.771
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.779
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.671
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.672
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.702
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.735
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.720
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.718
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.758
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.758
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.676
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.675
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.674
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.778
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.805
MDP0000407613 Malus domestica MDP0000407613 N 0.832
MDP0000155426 Malus domestica MDP0000155426 I 0.818
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.741
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.789
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.752
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.757
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.739
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.763
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.776
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.737
Pm015302 Prunus mume Pm015302 N 0.784
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.784
29933.m001454 Ricinus communis 29933.m001454 N 0.681
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.773
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.708
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.697
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.743
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.687
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.697
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.692
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.697
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.665
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.743
TCM_007865 Theobroma cacao TCM_007865 I 0.767
TCM_030020 Theobroma cacao TCM_030020 I 0.673
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.740
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.710