gene05167-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene05167-v1.0-hybrid T287244_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.785 0.882
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.754 0.839
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.667 0.742
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.667 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05167.1-v1.0-hybrid Myb 14 61
mrna05167.1-v1.0-hybrid Myb 67 112

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.879
Pm008294 Prunus mume Pm008294 I 0.867
TCM_021318 Theobroma cacao TCM_021318 I 0.842
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.842
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.827
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.821
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.821
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.820
Bo7g092680 Brassica oleracea Bo7g092680 I 0.810
Bra037419 Brassica rapa Bra037419 I 0.810
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.810
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.810
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.809
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.807
PK16958.1 Cannabis sativa PK16958.1 I 0.805
TCM_021317 Theobroma cacao TCM_021317 I 0.797
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.796
Cla009418 Citrullus lanatus Cla009418 I 0.788
MYB111 Arabidopsis thaliana AT5G49330 D 0.785
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.785
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.785
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.785
Si039538m.g Setaria italica Si039538m.g I 0.779
Cla022107 Citrullus lanatus Cla022107 I 0.779
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.779
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.779
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.778
MDP0000119725 Malus domestica MDP0000119725 I 0.778
MDP0000607330 Malus domestica MDP0000607330 I 0.778
Bra036145 Brassica rapa Bra036145 I 0.776
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.776
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.775
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.775
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.775
MYB12 Arabidopsis thaliana AT2G47460 I 0.773
Bra000453 Brassica rapa Bra000453 I 0.773
F775_11235 Aegilops tauschii F775_11235 I 0.773
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.773
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.773
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.773
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.773
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.773
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.773
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.773
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.773
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.771
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.770
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.769
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.769
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.768
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.768
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.768
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.768
Ca_03498 Cicer arietinum Ca_03498 I 0.768
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.767
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.767
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.766
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.766
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.766
Bo3g039690 Brassica oleracea Bo3g039690 I 0.764
TCM_004777 Theobroma cacao TCM_004777 I 0.763
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.763
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.762
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.762
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.760
Si002107m.g Setaria italica Si002107m.g I 0.760
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.759
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.758
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.757
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.757
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.757
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.756
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.756
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.756
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.755
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.755
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.754
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.754
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.754
PK06182.1 Cannabis sativa PK06182.1 D 0.754
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.753
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.753
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.753
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.753
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.752
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.747
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.746
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.746
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.745
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.744
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.743
Bo4g004500 Brassica oleracea Bo4g004500 I 0.740
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.739
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.738
OBART03G14380 Oryza barthii OBART03G14380 I 0.738
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.738
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.738
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.738
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.737
mgf024278m Mimulus guttatus mgf024278m I 0.736
F775_18434 Aegilops tauschii F775_18434 I 0.735
Cla017646 Citrullus lanatus Cla017646 I 0.735
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.731
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.730
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.730
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.728
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.727
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.727
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.727
TCM_037555 Theobroma cacao TCM_037555 I 0.724
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.721
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.721
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.720
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.720
mgf003233m Mimulus guttatus mgf003233m I 0.720
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.715
Pm020104 Prunus mume Pm020104 I 0.713
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.712
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.711
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.709
OB03G24320 Oryza brachyantha OB03G24320 I 0.707
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.707
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.706
Ca_03154 Cicer arietinum Ca_03154 I 0.706
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.706
mgf012733m Mimulus guttatus mgf012733m I 0.705
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.704
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.694
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.694
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.694
MDP0000140609 Malus domestica MDP0000140609 I 0.691
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.690
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.690
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.690
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.690
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.690
OS01G0305900 Oryza sativa OS01G0305900 I 0.690
OB01G22640 Oryza brachyantha OB01G22640 I 0.689
TCM_000535 Theobroma cacao TCM_000535 I 0.689
MYB11 Arabidopsis thaliana AT3G62610 I 0.688
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.687
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.685
TCM_037379 Theobroma cacao TCM_037379 I 0.683
MDP0000887107 Malus domestica MDP0000887107 I 0.682
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.681
F775_21522 Aegilops tauschii F775_21522 I 0.680
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.680
TCM_010778 Theobroma cacao TCM_010778 I 0.680
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.679
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.679
Pm005570 Prunus mume Pm005570 I 0.679
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.679
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.679
MDP0000031172 Malus domestica MDP0000031172 I 0.679
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.679
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.678
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.677
TCM_037376 Theobroma cacao TCM_037376 I 0.676
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.676
Cla011528 Citrullus lanatus Cla011528 I 0.676
mgf025197m Mimulus guttatus mgf025197m I 0.676
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.676
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.676
MDP0000210851 Malus domestica MDP0000210851 I 0.676
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.676
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.675
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.675
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.675
TCM_011664 Theobroma cacao TCM_011664 I 0.675
TCM_037559 Theobroma cacao TCM_037559 I 0.675
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.675
PK23594.1 Cannabis sativa PK23594.1 I 0.675
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.673
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.673
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.673
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.673
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.673
Bo8g095790 Brassica oleracea Bo8g095790 I 0.672
Bra007588 Brassica rapa Bra007588 I 0.672
mgf006108m Mimulus guttatus mgf006108m I 0.672
MTR_1g100653 Medicago truncatula MTR_1g100653 I 0.671
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.671
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.670
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.670
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.670
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.669
GSMUA_Achr4G19030_001 Musa acuminata GSMUA_Achr4G19030_001 I 0.668
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.668
Pm027048 Prunus mume Pm027048 I 0.668
MDP0000868578 Malus domestica MDP0000868578 I 0.668
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.667
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.667
GLYMA04G38240 Glycine max GLYMA04G38240 I 0.667
GLYMA06G16820 Glycine max GLYMA06G16820 I 0.667
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.667
TCM_004509 Theobroma cacao TCM_004509 I 0.667
cassava1644.valid.m1 Manihot esculenta cassava1644.valid.m1 I 0.667
cassava4975.m1 Manihot esculenta cassava4975.m1 I 0.667
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.667
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.667
LjSGA_007368.1 Lotus japonicus LjSGA_007368.1 I 0.667
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.666
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.666
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.666
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.666
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.666
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.666
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.665
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.664
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.664
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.664
MDP0000136874 Malus domestica MDP0000136874 I 0.664
MDP0000298505 Malus domestica MDP0000298505 I 0.664
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.664
Bo3g044210 Brassica oleracea Bo3g044210 I 0.663
Bra000680 Brassica rapa Bra000680 I 0.663
Si038905m.g Setaria italica Si038905m.g I 0.663
TCM_011660 Theobroma cacao TCM_011660 I 0.663
TCM_029121 Theobroma cacao TCM_029121 I 0.663
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.663
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.663
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.663
PK16315.1 Cannabis sativa PK16315.1 I 0.663
30068.m002544 Ricinus communis 30068.m002544 I 0.662
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.662
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.661
MYB8 Arabidopsis thaliana AT1G35515 I 0.661
MYB14 Arabidopsis thaliana AT2G31180 I 0.661
Bo4g176020 Brassica oleracea Bo4g176020 I 0.661
Bo4g176030 Brassica oleracea Bo4g176030 I 0.661
Bra018267 Brassica rapa Bra018267 I 0.661
GLYMA10G38090 Glycine max GLYMA10G38090 I 0.661
GSMUA_Achr11G07180_001 Musa acuminata GSMUA_Achr11G07180_001 I 0.661
Pm025102 Prunus mume Pm025102 I 0.661
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.661
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.661