Gorai.001G044000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G044000 T287450_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.677 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G044000.1 Myb 13 60
Gorai.001G044000.1 Myb 66 111

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_038131 Theobroma cacao TCM_038131 I 0.898
Cla016951 Citrullus lanatus Cla016951 I 0.882
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.879
Bo2g047590 Brassica oleracea Bo2g047590 I 0.870
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.862
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I 0.862
Pm027586 Prunus mume Pm027586 I 0.861
Bra022602 Brassica rapa Bra022602 I 0.859
Cucsa.132300 Cucumis sativus Cucsa.132300 N 0.859
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.859
MYB82 Arabidopsis thaliana AT5G52600 I 0.858
Cagra.0084s0008 Capsella grandiflora Cagra.0084s0008 I 0.858
Carubv10028642m.g Capsella rubella Carubv10028642m.g I 0.858
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N 0.857
MDP0000264051 Malus domestica MDP0000264051 I 0.857
PK01088.1 Cannabis sativa PK01088.1 I 0.855
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.853
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I 0.853
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I 0.850
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N 0.841
AtMYB82 Arabidopsis lyrata Al_scaffold_0008_1642 I 0.836
MDP0000167314 Malus domestica MDP0000167314 I 0.835
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N 0.829
Bo3g023140 Brassica oleracea Bo3g023140 I 0.819
Bra029113 Brassica rapa Bra029113 I 0.819
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N 0.817
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I 0.802
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I 0.802
SapurV1A.0197s0090 Salix purpurea SapurV1A.0197s0090 N 0.796
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N 0.796
mgf023205m Mimulus guttatus mgf023205m I 0.790
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.771
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.737
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.735
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.730
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.718
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.717
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.708
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.707
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.705
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.703
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.703
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.703
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.698
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.697
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.697
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.697
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.695
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.694
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.694
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.694
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.693
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.692
Ca_01329 Cicer arietinum Ca_01329 I 0.691
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.690
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.690
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.689
Pm029489 Prunus mume Pm029489 I 0.689
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.689
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.689
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.686
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.686
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.686
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.686
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.686
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.685
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.685
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.685
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.684
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.682
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.682
TCM_037377 Theobroma cacao TCM_037377 I 0.679
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.679
TT2 Arabidopsis thaliana AT5G35550 I 0.678
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.678
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.678
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.678
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.678
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.678
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.678
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.677
TCM_037379 Theobroma cacao TCM_037379 I 0.677
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.677
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.675
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.674
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.673
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.673
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.672
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.672
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.672
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.671
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.671
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.671
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.670
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.669
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.669
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.667
Bra039395 Brassica rapa Bra039395 I 0.666
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.665
Pm005572 Prunus mume Pm005572 I 0.665
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.664
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.664
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.664
TCM_004509 Theobroma cacao TCM_004509 I 0.664
TCM_037376 Theobroma cacao TCM_037376 I 0.664
TCM_037555 Theobroma cacao TCM_037555 I 0.664
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.664
Ca_03154 Cicer arietinum Ca_03154 I 0.664
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.664
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.664
MYB5 Arabidopsis thaliana AT3G13540 I 0.663
Bo1g138250 Brassica oleracea Bo1g138250 I 0.663
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.663
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.663
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.663
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.663
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.662
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.662
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.662
TCM_024180 Theobroma cacao TCM_024180 I 0.662
TCM_025910 Theobroma cacao TCM_025910 I 0.662
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.662
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.662
e_gw1.6.239.1 Physcomitrella patens e_gw1.6.239.1 I 0.662
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.662
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.662
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.662
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.662
MDP0000655330 Malus domestica MDP0000655330 I 0.662
MDP0000723614 Malus domestica MDP0000723614 I 0.662
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.662
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.662
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.661
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.661
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.661
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.661
Pm005570 Prunus mume Pm005570 I 0.661
MDP0000031172 Malus domestica MDP0000031172 I 0.661
MDP0000210851 Malus domestica MDP0000210851 I 0.661
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.661