Gorai.001G087200 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G087200 T287455_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.816 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G087200.1 Myb 10 57
Gorai.001G087200.1 Myb 63 108

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.909
TCM_019192 Theobroma cacao TCM_019192 I 0.871
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.859
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.847
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.842
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.842
PK05760.1 Cannabis sativa PK05760.1 I 0.842
Bo6g100940 Brassica oleracea Bo6g100940 I 0.839
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.839
MYB75 Arabidopsis thaliana AT1G56650 I 0.836
MYB114 Arabidopsis thaliana AT1G66380 I 0.836
MYB90 Arabidopsis thaliana AT1G66390 I 0.836
Bo6g099880 Brassica oleracea Bo6g099880 I 0.836
Bra004162 Brassica rapa Bra004162 I 0.836
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.836
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.836
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.836
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.836
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.830
Bra001917 Brassica rapa Bra001917 I 0.826
Bo00835s060 Brassica oleracea Bo00835s060 I 0.825
Bra039763 Brassica rapa Bra039763 I 0.825
Pm029445 Prunus mume Pm029445 I 0.825
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.821
27763.m000042 Ricinus communis 27763.m000042 I 0.820
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.819
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.819
MYB113 Arabidopsis thaliana AT1G66370 D 0.816
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.808
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.805
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.805
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.803
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.803
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.802
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.802
Pm029442 Prunus mume Pm029442 I 0.801
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.799
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.799
Pm029440 Prunus mume Pm029440 I 0.798
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.797
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.795
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.794
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.792
TCM_026054 Theobroma cacao TCM_026054 I 0.792
PK17827.1 Cannabis sativa PK17827.1 I 0.791
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.789
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.789
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.788
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.788
mgf019317m Mimulus guttatus mgf019317m I 0.788
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.788
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.787
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.787
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.785
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.784
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.782
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.781
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.781
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.774
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.774
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.770
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.769
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.769
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.767
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.767
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.767
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.767
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.766
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.765
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.764
Ca_19630 Cicer arietinum Ca_19630 I 0.764
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.764
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.761
Ca_22078 Cicer arietinum Ca_22078 I 0.759
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.757
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.754
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.751
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.749
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.748
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.746
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.746
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.744
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.741
MDP0000192051 Malus domestica MDP0000192051 I 0.738
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I 0.737
30128.m008730 Ricinus communis 30128.m008730 I 0.737
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.736
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.732
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.732
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.727
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.727
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.726
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I 0.724
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I 0.724
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.724
mgf022565m Mimulus guttatus mgf022565m I 0.721
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.721
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.721
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I 0.721
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.720
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.720
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I 0.718
Lus10003277.g Linum usitatissimum Lus10003277.g I 0.717
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.716
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.712
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.711
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.710
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.710
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I 0.710
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.709
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.709
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I 0.705
Pm025429 Prunus mume Pm025429 I 0.705
Pm031337 Prunus mume Pm031337 I 0.705
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I 0.705
MDP0000478453 Malus domestica MDP0000478453 I 0.703
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I 0.702
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.700
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I 0.697
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I 0.697
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I 0.689
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.688
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.685
Si038905m.g Setaria italica Si038905m.g I 0.685
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.685
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.677
mgf019036m Mimulus guttatus mgf019036m N 0.671
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.670
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.670
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.669
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.669
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.668
Pm027047 Prunus mume Pm027047 I 0.668
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.666
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.665
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.664
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.664
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.664
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.664
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.664
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.663
Ciclev10017654m.g Citrus clementina Ciclev10017654m.g I 0.661
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.661
orange1.1g044864m.g Citrus sinensis orange1.1g044864m.g I 0.661