Lus10010273.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10010273.g T287935_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.739 0.871
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.714 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10010273 Myb 14 61
Lus10010273 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.824
MDP0000119725 Malus domestica MDP0000119725 I 0.749
MDP0000607330 Malus domestica MDP0000607330 I 0.749
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.747
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.746
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.746
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.741
Ca_03498 Cicer arietinum Ca_03498 I 0.741
PK06182.1 Cannabis sativa PK06182.1 D 0.739
Si039538m.g Setaria italica Si039538m.g I 0.737
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.737
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.732
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.732
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.732
OS01G0305900 Oryza sativa OS01G0305900 I 0.732
Cla017646 Citrullus lanatus Cla017646 I 0.732
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.726
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.725
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.725
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.724
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.723
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.722
OB01G22640 Oryza brachyantha OB01G22640 I 0.722
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.722
Bo3g039690 Brassica oleracea Bo3g039690 I 0.721
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.721
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.721
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.720
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.718
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.718
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.718
Bra000453 Brassica rapa Bra000453 I 0.717
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.717
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.717
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.717
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.717
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.717
F775_11235 Aegilops tauschii F775_11235 I 0.716
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.716
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.716
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.716
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.716
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.716
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.716
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.716
MYB111 Arabidopsis thaliana AT5G49330 D 0.714
MYB12 Arabidopsis thaliana AT2G47460 I 0.713
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.713
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.713
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.713
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.713
OB03G24320 Oryza brachyantha OB03G24320 I 0.713
OBART03G14380 Oryza barthii OBART03G14380 I 0.713
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.713
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.713
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.713
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.712
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.711
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.711
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.711
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.710
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.706
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.706
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.706
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.705
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.702
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.701
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.700
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.700
Cla022107 Citrullus lanatus Cla022107 I 0.700
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.698
Bo7g092680 Brassica oleracea Bo7g092680 I 0.697
Bra037419 Brassica rapa Bra037419 I 0.697
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.697
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.697
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.697
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.697
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.697
PK16958.1 Cannabis sativa PK16958.1 I 0.697
TCM_004777 Theobroma cacao TCM_004777 I 0.696
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.695
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.695
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.695
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.695
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.695
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.694
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.691
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.690
Pm008294 Prunus mume Pm008294 I 0.690
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.690
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.689
Si002107m.g Setaria italica Si002107m.g I 0.689
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.688
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.688
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.688
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.688
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.686
TCM_021318 Theobroma cacao TCM_021318 I 0.686
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.686
Bo4g004500 Brassica oleracea Bo4g004500 I 0.685
Pm020104 Prunus mume Pm020104 I 0.685
OBART01G11800 Oryza barthii OBART01G11800 I 0.684
ONIVA01G15380 Oryza nivara ONIVA01G15380 I 0.684
ORGLA01G0099200 Oryza glaberrima ORGLA01G0099200 I 0.684
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.684
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.682
Bra036145 Brassica rapa Bra036145 I 0.681
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.678
TCM_010778 Theobroma cacao TCM_010778 I 0.678
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.675
Cla009418 Citrullus lanatus Cla009418 I 0.675
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.675
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.674
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.674
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.674
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.674
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.673
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.673
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.673
TCM_037379 Theobroma cacao TCM_037379 I 0.672
TCM_037559 Theobroma cacao TCM_037559 I 0.672
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.671
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.671
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.671
TT2 Arabidopsis thaliana AT5G35550 I 0.670
Bo8g030520 Brassica oleracea Bo8g030520 I 0.670
Bra035532 Brassica rapa Bra035532 I 0.670
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.670
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.670
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.670
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.670
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.670
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.670
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.669
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.669
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.668
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.668
Ca_03154 Cicer arietinum Ca_03154 I 0.667
MYB11 Arabidopsis thaliana AT3G62610 I 0.666
MYB28 Arabidopsis thaliana AT5G61420 I 0.666
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.666
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.666
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.666
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.666
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.666
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.665
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.665
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.665
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.665
TCM_004509 Theobroma cacao TCM_004509 I 0.665
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.665
Pm005573 Prunus mume Pm005573 I 0.665
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.665
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.664
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.664
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.663
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.663
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.662
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.662
Cla011528 Citrullus lanatus Cla011528 I 0.662
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.662
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.661