Lus10010844.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10010844.g T287940_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21687.1
M01282_2.00
Cannabis sativa
HWAAACCYH

DRGGTTTWD
PBM
Lambert et al.(2019)
pTH11299
0.909 0.979
TRP2
M07092_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCC

GGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_col_a
0.901 0.957
TRP2
M07093_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT

AGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_colamp_a
0.901 0.957
TRP1
M07148_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA

TTAGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP1_col
0.891 0.957
TRP5
M01266_2.00
Arabidopsis thaliana
NHWAAACCYH

DRGGTTTWDN
PBM
Lambert et al.(2019)
pTH9963
0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10010844 Myb 573 623

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMAG_19058 Allomyces macrogynus AMAG_19058 I
AMAG_16339 Allomyces macrogynus AMAG_16339 I
CAGL0C02277g Candida glabrata CAGL0C02277g I
G210_5718 Candida maltosa G210_5718 I
CORT_0A04570 Candida orthopsilosis CORT_0A04570 I
CPAG_02050 Candida parapsilosis CPAG_02050 I
CANTEDRAFT_137034 Candida tenuis CANTEDRAFT_137034 I
DEHA2F10384g Debaryomyces hansenii DEHA2F10384g I
LALA0_S01e01838g Lachancea lanzarotensis LALA0_S01e01838g I
LELG_00353 Lodderomyces elongisporus LELG_00353 I
RO3G_05383 Rhizopus oryzae RO3G_05383 I
RO3G_00657 Rhizopus oryzae RO3G_00657 I
SU7_0865 Saccharomyces arboricola SU7_0865 I
6302_YER040W Saccharomyces bayanus 6302_YER040W I
6025_YER040W Saccharomyces mikatae 6025_YER040W I
6181_YER040W Saccharomyces paradoxus 6181_YER040W I
BN7_575 Wickerhamomyces ciferrii BN7_575 I
YALI0_F17886g Yarrowia lipolytica YALI0_F17886g I