Lus10016413.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10016413.g T287991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.709 0.774
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.709 0.774
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.709 0.774
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.704 0.742
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.704 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016413 Myb 14 64
Lus10016413 Myb 70 115

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10019707.g Linum usitatissimum Lus10019707.g I 0.867
Lus10029520.g Linum usitatissimum Lus10029520.g I 0.756
Lus10039610.g Linum usitatissimum Lus10039610.g I 0.756
Cucsa.127860 Cucumis sativus Cucsa.127860 I 0.755
Lus10027369.g Linum usitatissimum Lus10027369.g I 0.751
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I 0.749
Cla017541 Citrullus lanatus Cla017541 I 0.745
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.745
Lus10002559.g Linum usitatissimum Lus10002559.g I 0.743
Cla008683 Citrullus lanatus Cla008683 I 0.739
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.739
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.739
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.730
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.730
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.730
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I 0.730
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.730
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.730
MDP0000204495 Malus domestica MDP0000204495 I 0.730
MDP0000722954 Malus domestica MDP0000722954 I 0.730
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.730
PK13930.1 Cannabis sativa PK13930.1 I 0.730
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.722
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.721
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I 0.721
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.719
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.719
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.719
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.719
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.719
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.715
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.714
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.712
gene14666-v1.0-hybrid Fragaria vesca gene14666-v1.0-hybrid I 0.712
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.710
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.710
MYB83 Arabidopsis thaliana AT3G08500 D 0.709
Bo5g139830 Brassica oleracea Bo5g139830 I 0.709
Bra029696 Brassica rapa Bra029696 I 0.709
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.709
TCM_005885 Theobroma cacao TCM_005885 I 0.709
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.709
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.709
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.709
GLYMA13G41470 Glycine max GLYMA13G41470 I 0.708
GLYMA15G03920 Glycine max GLYMA15G03920 I 0.708
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I 0.705
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.705
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.705
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.705
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.705
Lus10031850.g Linum usitatissimum Lus10031850.g I 0.705
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.705
PK14287.1 Cannabis sativa PK14287.1 I 0.705
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I 0.705
MYB46 Arabidopsis thaliana AT5G12870 D 0.704
Bo9g169270 Brassica oleracea Bo9g169270 I 0.704
Bra008875 Brassica rapa Bra008875 I 0.704
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I 0.704
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I 0.704
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I 0.704
Carubv10001573m.g Capsella rubella Carubv10001573m.g I 0.704
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I 0.704
mgf024753m Mimulus guttatus mgf024753m I 0.703
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.702
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.700
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.700
Gorai.006G129100 Gossypium raimondii Gorai.006G129100 I 0.700
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.700
AtMYB32 Arabidopsis lyrata scaffold_700628.1 I 0.698
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.698
MTR_3g028740 Medicago truncatula MTR_3g028740 I 0.697
MTR_2g097910 Medicago truncatula MTR_2g097910 I 0.695
Solyc08g081500.1 Solanum lycopersicum Solyc08g081500.1 I 0.695
evm.TU.supercontig_214.5 Carica papaya evm.TU.supercontig_214.5 I 0.695
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.694
GLYMA19G05080 Glycine max GLYMA19G05080 I 0.694
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I 0.694
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I 0.694
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I 0.694
Pm016295 Prunus mume Pm016295 I 0.694
MDP0000736994 Malus domestica MDP0000736994 I 0.694
Bra011576 Brassica rapa Bra011576 I 0.692
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I 0.692
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.692
Thhalv10025926m.g Eutrema salsugineum Thhalv10025926m.g I 0.692
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.691
POPTR_0001s26590 Populus trichocarpa POPTR_0001s26590 I 0.690
SapurV1A.0925s0070 Salix purpurea SapurV1A.0925s0070 I 0.690
Bo7g117140 Brassica oleracea Bo7g117140 I 0.688
Bra017685 Brassica rapa Bra017685 I 0.688
MYB26 Arabidopsis thaliana AT3G13890 I 0.687
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.687
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.687
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.687
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.687
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.687
Ca_05777 Cicer arietinum Ca_05777 I 0.686
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.685
Cla003497 Citrullus lanatus Cla003497 I 0.684
Pm012272 Prunus mume Pm012272 I 0.683
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I 0.683
MYB7 Arabidopsis thaliana AT2G16720 I 0.681
MYB7 Arabidopsis lyrata scaffold_303957.1 I 0.681
Bostr.18351s0132 Boechera stricta Bostr.18351s0132 I 0.681
Cagra.1533s0005 Capsella grandiflora Cagra.1533s0005 I 0.681
Carubv10014371m.g Capsella rubella Carubv10014371m.g I 0.681
Thhalv10022799m.g Eutrema salsugineum Thhalv10022799m.g I 0.681
Bo3g008870 Brassica oleracea Bo3g008870 I 0.680
Bra006166 Brassica rapa Bra006166 I 0.680
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I 0.680
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I 0.677
POPTR_0019s00750 Populus trichocarpa POPTR_0019s00750 I 0.677
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.675
Bo2g010970 Brassica oleracea Bo2g010970 I 0.674
Bo5g009920 Brassica oleracea Bo5g009920 I 0.674
F775_19511 Aegilops tauschii F775_19511 I 0.674
Traes_5BL_30D8E6BE2 Triticum aestivum Traes_5BL_30D8E6BE2 I 0.674
Traes_5DL_0B2C5ADF6 Triticum aestivum Traes_5DL_0B2C5ADF6 I 0.674
Cagra.1383s0046 Capsella grandiflora Cagra.1383s0046 I 0.673
Carubv10005426m.g Capsella rubella Carubv10005426m.g I 0.673
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.673
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I 0.672
GSMUA_Achr6G12930_001 Musa acuminata GSMUA_Achr6G12930_001 I 0.671
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.671
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.670
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.670
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.670
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.669
LjSGA_115006.1 Lotus japonicus LjSGA_115006.1 I 0.669
MYB32 Arabidopsis thaliana AT4G34990 I 0.668
Bo1g006820 Brassica oleracea Bo1g006820 I 0.668
Bostr.7867s1358 Boechera stricta Bostr.7867s1358 I 0.668
Cagra.2350s0045 Capsella grandiflora Cagra.2350s0045 I 0.668
Carubv10005438m.g Capsella rubella Carubv10005438m.g I 0.668
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.667
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.667
mgf024107m Mimulus guttatus mgf024107m I 0.667
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.667
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.667
GLYMA05G37460 Glycine max GLYMA05G37460 I 0.666
AtMYB103 Arabidopsis thaliana AT1G63910 I 0.665
MYB86 Arabidopsis thaliana AT5G26660 I 0.665
Bo2g156300 Brassica oleracea Bo2g156300 I 0.665
Bo7g095130 Brassica oleracea Bo7g095130 I 0.665
Bo9g010860 Brassica oleracea Bo9g010860 I 0.665
Bo9g029530 Brassica oleracea Bo9g029530 I 0.665
Bo9g033970 Brassica oleracea Bo9g033970 I 0.665
Bra036588 Brassica rapa Bra036588 I 0.665
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.665
F775_28951 Aegilops tauschii F775_28951 I 0.665
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000072 I 0.665
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.665
GLYMA01G43120 Glycine max GLYMA01G43120 I 0.665
GLYMA08G02080 Glycine max GLYMA08G02080 I 0.665
GLYMA11G02400 Glycine max GLYMA11G02400 I 0.665
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.665
GSMUA_Achr6G36930_001 Musa acuminata GSMUA_Achr6G36930_001 I 0.665
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.665
MTR_5g010020 Medicago truncatula MTR_5g010020 I 0.665
MTR_8g098860 Medicago truncatula MTR_8g098860 I 0.665
POPTR_0001s09810 Populus trichocarpa POPTR_0001s09810 I 0.665
POPTR_0003s13190 Populus trichocarpa POPTR_0003s13190 I 0.665
PRUPE_ppa019529mg Prunus persica PRUPE_ppa019529mg I 0.665
TCM_016332 Theobroma cacao TCM_016332 I 0.665
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.665
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.665
AtMYB103 Vitis vinifera VIT_02s0025g00320 I 0.665
Cla011601 Citrullus lanatus Cla011601 I 0.665
Pm023937 Prunus mume Pm023937 I 0.665
30190.m011268 Ricinus communis 30190.m011268 I 0.665
cassava33475.m1 Manihot esculenta cassava33475.m1 I 0.665
cassava39324.m1 Manihot esculenta cassava39324.m1 I 0.665
Cucsa.303440 Cucumis sativus Cucsa.303440 I 0.665
Aquca_013_00221 Aquilegia coerulea Aquca_013_00221 I 0.665
Bostr.29223s0142 Boechera stricta Bostr.29223s0142 I 0.665
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.665
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.665
Cagra.6972s0001 Capsella grandiflora Cagra.6972s0001 I 0.665
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.665
Carubv10021858m.g Capsella rubella Carubv10021858m.g I 0.665
Ciclev10021161m.g Citrus clementina Ciclev10021161m.g I 0.665
Eucgr.D01819 Eucalyptus grandis Eucgr.D01819 I 0.665
gene31835-v1.0-hybrid Fragaria vesca gene31835-v1.0-hybrid I 0.665
Gorai.004G138300 Gossypium raimondii Gorai.004G138300 I 0.665
Lus10024669.g Linum usitatissimum Lus10024669.g I 0.665
Lus10032298.g Linum usitatissimum Lus10032298.g I 0.665
orange1.1g020613m.g Citrus sinensis orange1.1g020613m.g I 0.665
SapurV1A.0098s0320 Salix purpurea SapurV1A.0098s0320 I 0.665
SapurV1A.0119s0140 Salix purpurea SapurV1A.0119s0140 I 0.665
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.665
Thhalv10023601m.g Eutrema salsugineum Thhalv10023601m.g I 0.665
Thhalv10023948m.g Eutrema salsugineum Thhalv10023948m.g I 0.665
PK02515.1 Cannabis sativa PK02515.1 I 0.665
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.665
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.664
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.664
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.664
Cla005219 Citrullus lanatus Cla005219 I 0.664
Cla020303 Citrullus lanatus Cla020303 I 0.664
Pm029185 Prunus mume Pm029185 I 0.664
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.664
Cucsa.090310 Cucumis sativus Cucsa.090310 I 0.664
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.664
Lus10001548.g Linum usitatissimum Lus10001548.g I 0.664
Lus10009448.g Linum usitatissimum Lus10009448.g I 0.664
Lus10014129.g Linum usitatissimum Lus10014129.g I 0.664
MDP0000601420 Malus domestica MDP0000601420 I 0.664
MDP0000653903 Malus domestica MDP0000653903 I 0.664
MDP0000932804 Malus domestica MDP0000932804 I 0.664
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.664
PK03176.1 Cannabis sativa PK03176.1 I 0.664
Bo3g061630 Brassica oleracea Bo3g061630 I 0.663
Bra001284 Brassica rapa Bra001284 I 0.663
MLOC_6696 Hordeum vulgare MLOC_6696 I 0.663
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I 0.663
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I 0.663
PK11717.1 Cannabis sativa PK11717.1 I 0.663
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.662
GRMZM2G419239 Zea mays GRMZM2G419239 I 0.662
TCM_010839 Theobroma cacao TCM_010839 I 0.662
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.662
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.662
BGIOSGA036092 Oryza indica BGIOSGA036092 I 0.661
OBART12G13720 Oryza barthii OBART12G13720 I 0.661
OGLUM12G15400 Oryza glumaepatula OGLUM12G15400 I 0.661
OMERI12G09660 Oryza meridionalis OMERI12G09660 I 0.661
ONIVA05G29400 Oryza nivara ONIVA05G29400 I 0.661
OPUNC12G12380 Oryza punctata OPUNC12G12380 I 0.661
ORGLA12G0120900 Oryza glaberrima ORGLA12G0120900 I 0.661
ORUFI12G15040 Oryza rufipogon ORUFI12G15040 I 0.661
Si024786m.g Setaria italica Si024786m.g I 0.661
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.661
Pavir.Ca02370 Panicum virgatum Pavir.Ca02370 I 0.661