Lus10030938.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10030938.g T288129_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.723 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10030938 Myb 307 357

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.807
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.752
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.752
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.752
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.744
MDP0000248863 Malus domestica MDP0000248863 I 0.739
Cla008926 Citrullus lanatus Cla008926 I 0.737
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.737
Bo1g019180 Brassica oleracea Bo1g019180 I 0.734
Bo7g105690 Brassica oleracea Bo7g105690 I 0.734
Bra012623 Brassica rapa Bra012623 I 0.734
Bra013277 Brassica rapa Bra013277 I 0.734
Bra013278 Brassica rapa Bra013278 I 0.734
Bra013279 Brassica rapa Bra013279 I 0.734
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.734
TCM_015780 Theobroma cacao TCM_015780 I 0.734
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.734
Pm014733 Prunus mume Pm014733 I 0.734
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.734
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.734
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.734
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.734
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.734
PK19826.1 Cannabis sativa PK19826.1 I 0.734
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.732
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.726
APRR2 Arabidopsis thaliana AT4G18020 D 0.723
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.723
MDP0000237396 Malus domestica MDP0000237396 I 0.720
30054.m000786 Ricinus communis 30054.m000786 I 0.716
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.716
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.686
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.674
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.674
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.663
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.663