Lus10038022.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10038022.g T288193_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.888 0.968
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.888 0.968
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.888 0.968
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.823 0.882
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.823 0.882
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.687 0.720
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.682 0.731
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.682 0.731
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.682 0.731
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.674 0.763
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.674 0.763
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.671 0.667
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.671 0.667
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.665 0.677
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.665 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038022 Myb 14 61
Lus10038022 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

842 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009700 Calypte anna Aan_R009700 I
Afo_R014821 Aptenodytes forsteri Afo_R014821 I
Alligator_sinensis_CCG001947.1 Alligator sinensis Alligator_sinensis_CCG001947.1 I
Brh_R011452 Buceros rhinoceros Brh_R011452 I
Cmyd_10007876 Chelonia mydas Cmyd_10007876 I
ZBTB2 Anolis carolinensis ENSACAG00000006317 I
ENSAMEG00000011098 Ailuropoda melanoleuca ENSAMEG00000011098 I
ENSAMXG00000006249 Astyanax mexicanus ENSAMXG00000006249 I
ENSAPLG00000011819 Anas platyrhynchos ENSAPLG00000011819 I
ZBTB2 Bos taurus ENSBTAG00000014790 I
ZBTB2 Canis familiaris ENSCAFG00000000422 I
ZBTB2 Callithrix jacchus ENSCJAG00000013393 I
ENSCPOG00000002040 Cavia porcellus ENSCPOG00000002040 I
ENSCSAG00000014259 Chlorocebus sabaeus ENSCSAG00000014259 I
zbtb2b Danio rerio ENSDARG00000028086 I
ZBTB2 Dasypus novemcinctus ENSDNOG00000047729 I
Zbtb2 Dipodomys ordii ENSDORG00000013305 I
ZBTB2 Equus caballus ENSECAG00000021762 I
ENSFALG00000012253 Ficedula albicollis ENSFALG00000012253 I
ZBTB2 Felis catus ENSFCAG00000022354 I
ZBTB2 Homo sapiens ENSG00000181472 D
zbtb2b Gasterosteus aculeatus ENSGACG00000008691 I
ZBTB2 Gallus gallus ENSGALG00000012966 I
ZBTB2 Gorilla gorilla ENSGGOG00000010529 I
ENSGMOG00000007509 Gadus morhua ENSGMOG00000007509 I
ZBTB2 Loxodonta africana ENSLAFG00000001805 I
ENSLOCG00000016295 Lepisosteus oculatus ENSLOCG00000016295 I
ENSMEUG00000012838 Macropus eugenii ENSMEUG00000012838 I
ZBTB2 Meleagris gallopavo ENSMGAG00000012677 I
ENSMICG00000010578 Microcebus murinus ENSMICG00000010578 I
ZBTB2 Myotis lucifugus ENSMLUG00000001314 I
ZBTB2 Macaca mulatta ENSMMUG00000029475 I
ZBTB2 Monodelphis domestica ENSMODG00000016757 I
Zbtb2 Mus musculus ENSMUSG00000075327 I
ENSNLEG00000015384 Nomascus leucogenys ENSNLEG00000015384 I
ZBTB2 Ornithorhynchus anatinus ENSOANG00000003326 I
ENSOARG00000003148 Ovis aries ENSOARG00000003148 I
ZBTB2 Oryctolagus cuniculus ENSOCUG00000022931 I
ZBTB2 Otolemur garnettii ENSOGAG00000005262 I
ENSONIG00000013371 Oreochromis niloticus ENSONIG00000013371 I
ENSP00000323183 Macaca fascicularis ENSP00000323183 I
ENSP00000323183-D1 Bos grunniens ENSP00000323183-D1 I
ZBTB2 Procavia capensis ENSPCAG00000013849 I
ENSPPYG00000017107 Pongo abelii ENSPPYG00000017107 I
ENSPSIG00000018246 Pelodiscus sinensis ENSPSIG00000018246 I
ZBTB2 Pan troglodytes ENSPTRG00000018712 I
Zbtb2 Rattus norvegicus ENSRNOG00000019544 I
ENSSHAG00000013043 Sarcophilus harrisii ENSSHAG00000013043 I
ZBTB2 Sus scrofa ENSSSCG00000004090 I
ENSSTOG00000021611 Ictidomys tridecemlineatus ENSSTOG00000021611 I
ZBTB2 Taeniopygia guttata ENSTGUG00000011276 I
zbtb2b Tetraodon nigroviridis ENSTNIG00000012263 I
zbtb2b Takifugu rubripes ENSTRUG00000018234 I
ENSTSYG00000000113 Tarsius syrichta ENSTSYG00000000113 I
ZBTB2 Tursiops truncatus ENSTTRG00000014190 I
Gfo_R006405 Geospiza fortis Gfo_R006405 I
Myotis_brandtii_ZBTB2_10021316 Myotis brandtii Myotis_brandtii_ZBTB2_10021316 I
Ogr17347 Ophisaurus gracilis Ogr17347 I
Pvit_17227 Pogona vitticeps Pvit_17227 I
Tal_R001183 Tyto alba Tal_R001183 I
zbtb2.L Xenopus laevis XB-GENE-6255749 I
zbtb2 Xenopus tropicalis XB-GENE-977864 I