CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000237596
(
Malus domestica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
MDP0000237596
T288467_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000237596
Myb
11
58
KGPWKAEEDEVLLNHVKKCGPRDWSSIRSKGLLQRTGKSCRLRWVNKL
MDP0000237596
Myb
65
109
GCKFSVEEERVVIELQAQFGNKWARIATYLPGRTDNDVKNFWSSR
Links
Other
Myb/SANT
family TFs
Other
Malus domestica
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000319634
Malus domestica
MDP0000319634
N
0.909
30174.m008784
Ricinus communis
30174.m008784
N
0.906
TCM_005653
Theobroma cacao
TCM_005653
N
0.889
Pm017596
Prunus mume
Pm017596
N
0.889
evm.TU.supercontig_37.96
Carica papaya
evm.TU.supercontig_37.96
N
0.889
PRUPE_ppa020326mg
Prunus persica
PRUPE_ppa020326mg
N
0.867
GLYMA03G26830
Glycine max
GLYMA03G26830
N
0.865
DUO1
Vitis vinifera
VIT_15s0021g02040
N
0.864
Ciclev10021345m.g
Citrus clementina
Ciclev10021345m.g
N
0.864
orange1.1g038795m.g
Citrus sinensis
orange1.1g038795m.g
N
0.864
gene04800-v1.0-hybrid
Fragaria vesca
gene04800-v1.0-hybrid
N
0.863
cassava17368.m1
Manihot esculenta
cassava17368.m1
N
0.861
Eucgr.E01581
Eucalyptus grandis
Eucgr.E01581
N
0.860
POPTR_0002s14180
Populus trichocarpa
POPTR_0002s14180
N
0.859
SapurV1A.0033s0200
Salix purpurea
SapurV1A.0033s0200
N
0.859
LjT36B17.50.nd
Lotus japonicus
LjT36B17.50.nd
N
0.858
GLYMA07G14480
Glycine max
GLYMA07G14480
N
0.856
PGSC0003DMG400025720
Solanum tuberosum
PGSC0003DMG400025720
N
0.847
mgf019330m
Mimulus guttatus
mgf019330m
N
0.847
MTR_8g006470
Medicago truncatula
MTR_8g006470
N
0.846
gene12261-v1.0-hybrid
Fragaria vesca
gene12261-v1.0-hybrid
N
0.846
Pavir.Fb01900
Panicum virgatum
Pavir.Fb01900
N
0.843
Gorai.004G165400
Gossypium raimondii
Gorai.004G165400
N
0.841
MTR_4g029540
Medicago truncatula
MTR_4g029540
N
0.839
PRUPE_ppa016603mg
Prunus persica
PRUPE_ppa016603mg
N
0.836
Pm019530
Prunus mume
Pm019530
N
0.836
Pm031387
Prunus mume
Pm031387
N
0.836
SapurV1A.0490s0170
Salix purpurea
SapurV1A.0490s0170
N
0.836
Solyc01g090530.1
Solanum lycopersicum
Solyc01g090530.1
N
0.833
Si012032m.g
Setaria italica
Si012032m.g
N
0.831
Pavir.Gb01130
Panicum virgatum
Pavir.Gb01130
N
0.831
Cagra.3527s0008
Capsella grandiflora
Cagra.3527s0008
N
0.829
Carubv10019483m.g
Capsella rubella
Carubv10019483m.g
N
0.829
POPTR_0014s05370
Populus trichocarpa
POPTR_0014s05370
N
0.828
POPTR_0014s05420
Populus trichocarpa
POPTR_0014s05420
N
0.828
Cla006831
Citrullus lanatus
Cla006831
N
0.825
Pavir.J30013
Panicum virgatum
Pavir.J30013
N
0.824
Pavir.J35399
Panicum virgatum
Pavir.J35399
N
0.824
Traes_2AL_0A21FB42C
Triticum aestivum
Traes_2AL_0A21FB42C
N
0.820
Traes_2BL_855A1170C
Triticum aestivum
Traes_2BL_855A1170C
N
0.820
BGIOSGA016880
Oryza indica
BGIOSGA016880
N
0.816
GRMZM2G105137
Zea mays
GRMZM2G105137
N
0.816
OB04G27810
Oryza brachyantha
OB04G27810
N
0.816
OBART04G20790
Oryza barthii
OBART04G20790
N
0.816
OGLUM04G20730
Oryza glumaepatula
OGLUM04G20730
N
0.816
OMERI04G17240
Oryza meridionalis
OMERI04G17240
N
0.816
ONIVA04G19030
Oryza nivara
ONIVA04G19030
N
0.816
OPUNC04G18480
Oryza punctata
OPUNC04G18480
N
0.816
ORGLA04G0178400
Oryza glaberrima
ORGLA04G0178400
N
0.816
ORUFI04G22380
Oryza rufipogon
ORUFI04G22380
N
0.816
Bo8g095200
Brassica oleracea
Bo8g095200
N
0.815
Bra007536
Brassica rapa
Bra007536
N
0.815
cassava19913.m1
Manihot esculenta
cassava19913.m1
N
0.814
Solyc10g019260.1
Solanum lycopersicum
Solyc10g019260.1
N
0.812
Cucsa.121070
Cucumis sativus
Cucsa.121070
N
0.811
Ca_18954
Cicer arietinum
Ca_18954
N
0.808
DUO1
Arabidopsis thaliana
AT3G60460
N
0.804
Bra003413
Brassica rapa
Bra003413
N
0.804
DUO1
Arabidopsis lyrata
fgenesh2_kg.5__2511__AT3G60460.1
N
0.804
Bostr.13158s0042
Boechera stricta
Bostr.13158s0042
N
0.804
Bo6g077030
Brassica oleracea
Bo6g077030
N
0.795
Traes_2DL_912473A86
Triticum aestivum
Traes_2DL_912473A86
N
0.794
Si015815m.g
Setaria italica
Si015815m.g
N
0.792
Pavir.Fa00479
Panicum virgatum
Pavir.Fa00479
N
0.792
BRADI5G17600
Brachypodium distachyon
BRADI5G17600
N
0.791
Thhalv10006475m.g
Eutrema salsugineum
Thhalv10006475m.g
N
0.789
Sb06g024510
Sorghum bicolor
Sb06g024510
N
0.788
TCM_014872
Theobroma cacao
TCM_014872
N
0.788
Aquca_081_00025
Aquilegia coerulea
Aquca_081_00025
N
0.788
GRMZM2G311059
Zea mays
GRMZM2G311059
N
0.778
Aquca_002_00029
Aquilegia coerulea
Aquca_002_00029
N
0.775
Sb07g027160
Sorghum bicolor
Sb07g027160
N
0.773
Ca_19557
Cicer arietinum
Ca_19557
N
0.773
Cla010897
Citrullus lanatus
Cla010897
N
0.773
GLYMA09G00371
Glycine max
GLYMA09G00371
N
0.767
GLYMA12G37026
Glycine max
GLYMA12G37026
N
0.764
Lus10009780.g
Linum usitatissimum
Lus10009780.g
N
0.758
GRMZM2G046443
Zea mays
GRMZM2G046443
N
0.756
GSMUA_Achr1G01660_001
Musa acuminata
GSMUA_Achr1G01660_001
N
0.752
Cucsa.094180
Cucumis sativus
Cucsa.094180
N
0.749
Bostr.13158s0046
Boechera stricta
Bostr.13158s0046
N
0.736
AMTR_s00111p00072510
Amborella trichopoda
AMTR_s00111p00072510
N
0.726
mgf004314m
Mimulus guttatus
mgf004314m
N
0.715
Gorai.003G112700
Gossypium raimondii
Gorai.003G112700
N
0.696
SELMODRAFT_116971
Selaginella moellendorffii
SELMODRAFT_116971
N
0.677
SELMODRAFT_118852
Selaginella moellendorffii
SELMODRAFT_118852
N
0.677