CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000641708
(
Malus domestica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
MDP0000641708
T288670_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.721
0.796
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY
RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.700
0.774
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.700
0.763
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.700
0.763
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.682
0.785
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.682
0.785
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.682
0.785
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.679
0.753
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.671
0.710
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY
RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.667
0.796
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.667
0.796
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.667
0.796
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.667
0.796
F3A4.140
M11044_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.667
0.796
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000641708
Myb
34
80
KGPWSAEEDRVLTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQL
MDP0000641708
Myb
86
131
HRSFSQAEDETILAAQARFGNRWATIARLLPGRTDNAVKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Malus domestica
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000477900
Malus domestica
MDP0000477900
I
0.909
MDP0000480596
Malus domestica
MDP0000480596
I
0.909
MDP0000784297
Malus domestica
MDP0000784297
I
0.909
MDP0000823270
Malus domestica
MDP0000823270
I
0.909
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.883
Pm005220
Prunus mume
Pm005220
I
0.883
MDP0000894463
Malus domestica
MDP0000894463
I
0.883
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.858
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.849
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.841
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.837
30170.m013927
Ricinus communis
30170.m013927
I
0.832
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.832
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.832
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.832
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.832
Cla021015
Citrullus lanatus
Cla021015
I
0.824
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.824
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.812
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.811
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.808
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.800
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.799
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.796
Cla022889
Citrullus lanatus
Cla022889
I
0.796
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.796
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.794
TCM_033907
Theobroma cacao
TCM_033907
I
0.792
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.791
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
0.787
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.787
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.783
Ca_01522
Cicer arietinum
Ca_01522
I
0.778
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.773
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.756
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.749
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.749
TCM_007138
Theobroma cacao
TCM_007138
I
0.749
PK29071.1
Cannabis sativa
PK29071.1
I
0.749
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.743
GLYMA17G36370
Glycine max
GLYMA17G36370
I
0.741
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.736
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.733
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.730
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.729
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.729
MYB73
Arabidopsis thaliana
AT4G37260
D
0.721
Bostr.7867s1585
Boechera stricta
Bostr.7867s1585
I
0.721
Cagra.1232s0025
Capsella grandiflora
Cagra.1232s0025
I
0.721
Carubv10007638m.g
Capsella rubella
Carubv10007638m.g
I
0.721
mgf006151m
Mimulus guttatus
mgf006151m
I
0.720
mgf003084m
Mimulus guttatus
mgf003084m
I
0.717
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.715
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.714
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.714
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
0.713
Bo4g151410
Brassica oleracea
Bo4g151410
I
0.712
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.712
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.712
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.712
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.709
PGSC0003DMG400024983
Solanum tuberosum
PGSC0003DMG400024983
I
0.709
Solyc02g092930.1
Solanum lycopersicum
Solyc02g092930.1
I
0.709
TCM_000696
Theobroma cacao
TCM_000696
I
0.709
29970.m000987
Ricinus communis
29970.m000987
I
0.709
30170.m013698
Ricinus communis
30170.m013698
I
0.709
cassava43120.valid.m1
Manihot esculenta
cassava43120.valid.m1
I
0.709
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.709
Bostr.27895s0157
Boechera stricta
Bostr.27895s0157
I
0.709
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
0.709
evm.TU.supercontig_6.98
Carica papaya
evm.TU.supercontig_6.98
I
0.709
Gorai.007G055600
Gossypium raimondii
Gorai.007G055600
I
0.709
Gorai.007G218100
Gossypium raimondii
Gorai.007G218100
I
0.709
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.709
PK17282.1
Cannabis sativa
PK17282.1
I
0.709
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
0.705
Bo1g004900
Brassica oleracea
Bo1g004900
I
0.704
Bo3g153550
Brassica oleracea
Bo3g153550
I
0.704
Bra011749
Brassica rapa
Bra011749
I
0.704
Thhalv10025742m.g
Eutrema salsugineum
Thhalv10025742m.g
I
0.704
GSMUA_Achr8G25220_001
Musa acuminata
GSMUA_Achr8G25220_001
I
0.703
Thhalv10000438m.g
Eutrema salsugineum
Thhalv10000438m.g
I
0.703
mgf023922m
Mimulus guttatus
mgf023922m
I
0.702
AtMYB70
Arabidopsis thaliana
AT2G23290
D
0.700
AtMYB70
Arabidopsis lyrata
fgenesh2_kg.4__260__AT2G23290.1
I
0.700
GLYMA01G39740
Glycine max
GLYMA01G39740
I
0.700
GLYMA11G05550
Glycine max
GLYMA11G05550
I
0.700
MTR_5g016510
Medicago truncatula
MTR_5g016510
I
0.700
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
0.700
PRUPE_ppa008450mg
Prunus persica
PRUPE_ppa008450mg
I
0.700
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.700
VIT_07s0129g01050
Vitis vinifera
VIT_07s0129g01050
I
0.700
VIT_18s0001g09850
Vitis vinifera
VIT_18s0001g09850
I
0.700
Ca_02182
Cicer arietinum
Ca_02182
I
0.700
Cla020946
Citrullus lanatus
Cla020946
I
0.700
Pm005332
Prunus mume
Pm005332
I
0.700
cassava2215.valid.m1
Manihot esculenta
cassava2215.valid.m1
I
0.700
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
0.700
gene24027-v1.0-hybrid
Fragaria vesca
gene24027-v1.0-hybrid
I
0.700
Lus10010260.g
Linum usitatissimum
Lus10010260.g
I
0.700
Lus10030336.g
Linum usitatissimum
Lus10030336.g
I
0.700
MDP0000196986
Malus domestica
MDP0000196986
I
0.700
MDP0000232454
Malus domestica
MDP0000232454
I
0.700
MDP0000463846
Malus domestica
MDP0000463846
I
0.700
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
0.700
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
0.700
PK28565.1
Cannabis sativa
PK28565.1
D
0.700
chr2.CM0250.240.nd
Lotus japonicus
chr2.CM0250.240.nd
I
0.700
Cla014191
Citrullus lanatus
Cla014191
I
0.696
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
0.696
MDP0000275800
Malus domestica
MDP0000275800
I
0.696
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
0.694
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.694
SapurV1A.0339s0020
Salix purpurea
SapurV1A.0339s0020
I
0.694
Bra010593
Brassica rapa
Bra010593
I
0.693
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.693
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.693
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.692
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.692
Si032789m.g
Setaria italica
Si032789m.g
I
0.692
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.692
GLYMA17G35620
Glycine max
GLYMA17G35620
I
0.690
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.690
Cla006872
Citrullus lanatus
Cla006872
I
0.689
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.688
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.688
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.688
OB09G10200
Oryza brachyantha
OB09G10200
I
0.688
OBART09G00310
Oryza barthii
OBART09G00310
I
0.688
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.688
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.688
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.688
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.688
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.688
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.688
OS09G0106700
Oryza sativa
OS09G0106700
I
0.688
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.688
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.688
Bra032176
Brassica rapa
Bra032176
I
0.687
Ciclev10026107m.g
Citrus clementina
Ciclev10026107m.g
I
0.684
orange1.1g021071m.g
Citrus sinensis
orange1.1g021071m.g
I
0.684
MYB44
Arabidopsis thaliana
AT5G67300
D
0.682
Bo7g063830
Brassica oleracea
Bo7g063830
I
0.682
Bra012149
Brassica rapa
Bra012149
I
0.682
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.682
ATMYBR1
Arabidopsis lyrata
scaffold_803378.1
I
0.682
Pm018951
Prunus mume
Pm018951
I
0.682
Bostr.0568s0154
Boechera stricta
Bostr.0568s0154
I
0.682
Cagra.0342s0017
Capsella grandiflora
Cagra.0342s0017
I
0.682
Carubv10027659m.g
Capsella rubella
Carubv10027659m.g
I
0.682
Thhalv10004676m.g
Eutrema salsugineum
Thhalv10004676m.g
I
0.682
GLYMA14G09540
Glycine max
GLYMA14G09540
I
0.681
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.680
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
0.679
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.679
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.679
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.679
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.679
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.679
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.679
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.679
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.679
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.679
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.679
OS02G0187700
Oryza sativa
OS02G0187700
D
0.679
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.679
Si017917m.g
Setaria italica
Si017917m.g
I
0.679
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.679
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.679
Bo7g099180
Brassica oleracea
Bo7g099180
I
0.678
Bra012910
Brassica rapa
Bra012910
I
0.678
mgf025567m
Mimulus guttatus
mgf025567m
I
0.678
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.678
Bra007186
Brassica rapa
Bra007186
I
0.676
Bra017813
Brassica rapa
Bra017813
I
0.676
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
0.675
Carubv10023692m.g
Capsella rubella
Carubv10023692m.g
I
0.675
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
0.675
SapurV1A.0167s0310
Salix purpurea
SapurV1A.0167s0310
I
0.675
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.674
Bo2g167960
Brassica oleracea
Bo2g167960
I
0.673
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.673
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
0.672
MYB1
Arabidopsis thaliana
AT3G09230
D
0.671
Bo7g118450
Brassica oleracea
Bo7g118450
I
0.671
Bostr.6864s0236
Boechera stricta
Bostr.6864s0236
I
0.671
mgf014089m
Mimulus guttatus
mgf014089m
I
0.670
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.669
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.669
Gorai.002G009300
Gossypium raimondii
Gorai.002G009300
I
0.668
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.668
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
0.668
F3A4.140
Arabidopsis thaliana
AT3G50060
D
0.667
Bo8g079430
Brassica oleracea
Bo8g079430
I
0.667
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.667
MYB77
Arabidopsis lyrata
fgenesh2_kg.5__1356__AT3G50060.1
I
0.667
GLYMA04G04490
Glycine max
GLYMA04G04490
I
0.667
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.667
Cagra.1549s0005
Capsella grandiflora
Cagra.1549s0005
I
0.667
Carubv10019440m.g
Capsella rubella
Carubv10019440m.g
I
0.667
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.667
Thhalv10010581m.g
Eutrema salsugineum
Thhalv10010581m.g
I
0.667
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.665
Cucsa.073130
Cucumis sativus
Cucsa.073130
I
0.665
chr5.CM0096.100.nc
Lotus japonicus
chr5.CM0096.100.nc
I
0.665
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.663
29801.m003096
Ricinus communis
29801.m003096
I
0.663
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
0.662
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.662
GLYMA09G12164
Glycine max
GLYMA09G12164
N
0.661