CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g009670m.g
(
Citrus sinensis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
orange1.1g009670m.g
T288772_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.744
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g009670m
Myb
193
243
RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVASHLQKFR
orange1.1g009824m
Myb
193
240
RVVWTTELHTKFIGAVNLLGLDKAVPKKILDLMNVEGLTRENVKFRLS
Links
Other
Myb/SANT
family TFs
Other
Citrus sinensis
TFs
153 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.791
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.791
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.791
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.791
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.783
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.783
TCM_037098
Theobroma cacao
TCM_037098
I
0.783
29737.m001227
Ricinus communis
29737.m001227
I
0.783
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.783
cassava37074.valid.m1
Manihot esculenta
cassava37074.valid.m1
I
0.783
cassava37075.valid.m1
Manihot esculenta
cassava37075.valid.m1
I
0.783
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.783
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.783
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.783
Gorai.001G030600
Gossypium raimondii
Gorai.001G030600
I
0.783
cassava18404.valid.m1
Manihot esculenta
cassava18404.valid.m1
I
0.772
cassava18405.valid.m1
Manihot esculenta
cassava18405.valid.m1
I
0.772
PGSC0003DMG400007823
Solanum tuberosum
PGSC0003DMG400007823
I
0.768
PRUPE_ppa018934mg
Prunus persica
PRUPE_ppa018934mg
I
0.768
Solyc12g010330.1
Solanum lycopersicum
Solyc12g010330.1
I
0.768
Pm027701
Prunus mume
Pm027701
I
0.768
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.768
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.768
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.768
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.768
Bo2g028820
Brassica oleracea
Bo2g028820
I
0.765
Bra020390
Brassica rapa
Bra020390
I
0.765
Thhalv10015296m.g
Eutrema salsugineum
Thhalv10015296m.g
I
0.765
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.765
chr5.CM0345.260.nd
Lotus japonicus
chr5.CM0345.260.nd
I
0.746
ARR18
Arabidopsis lyrata
Al_scaffold_0008_2276
I
0.744
ARR18
Arabidopsis thaliana
AT5G58080
D
0.744
GLYMA17G33230
Glycine max
GLYMA17G33230
I
0.743
Aquca_011_00344
Aquilegia coerulea
Aquca_011_00344
I
0.736
GLYMA02G09451
Glycine max
GLYMA02G09451
I
0.734
GLYMA07G26890
Glycine max
GLYMA07G26890
I
0.734
Ca_15151
Cicer arietinum
Ca_15151
I
0.734
MDP0000124301
Malus domestica
MDP0000124301
I
0.734
MDP0000155328
Malus domestica
MDP0000155328
I
0.734
GLYMA05G34516
Glycine max
GLYMA05G34516
I
0.732
PRUPE_ppa002493mg
Prunus persica
PRUPE_ppa002493mg
I
0.731
Pm005877
Prunus mume
Pm005877
I
0.731
MTR_2g450070
Medicago truncatula
MTR_2g450070
N
0.722
AMTR_s00086p00182350
Amborella trichopoda
AMTR_s00086p00182350
I
0.719
LjSGA_066155.1
Lotus japonicus
LjSGA_066155.1
I
0.719
LjSGA_125152.1
Lotus japonicus
LjSGA_125152.1
I
0.718
APRR4
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8000961
I
0.716
MTR_1g032570
Medicago truncatula
MTR_1g032570
I
0.716
TCM_015085
Theobroma cacao
TCM_015085
I
0.714
VIT_16s0100g00420
Vitis vinifera
VIT_16s0100g00420
I
0.708
evm.TU.supercontig_107.3
Carica papaya
evm.TU.supercontig_107.3
N
0.708
GSMUA_Achr10G23650_001
Musa acuminata
GSMUA_Achr10G23650_001
N
0.701
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.701
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.701
Ca_14780
Cicer arietinum
Ca_14780
I
0.698
MTR_4g131580
Medicago truncatula
MTR_4g131580
N
0.695
LjSGA_060038.1
Lotus japonicus
LjSGA_060038.1
I
0.695
AMTR_s00057p00108840
Amborella trichopoda
AMTR_s00057p00108840
I
0.693
gene15029-v1.0-hybrid
Fragaria vesca
gene15029-v1.0-hybrid
I
0.690
F775_03134
Aegilops tauschii
F775_03134
I
0.689
F775_03846
Aegilops tauschii
F775_03846
I
0.689
TRIUR3_20429
Triticum urartu
TRIUR3_20429
I
0.689
TRIUR3_25232
Triticum urartu
TRIUR3_25232
I
0.689
chr4.CM0042.1440.nc
Lotus japonicus
chr4.CM0042.1440.nc
I
0.689
GSMUA_Achr3G14630_001
Musa acuminata
GSMUA_Achr3G14630_001
I
0.688
Ca_03351
Cicer arietinum
Ca_03351
I
0.688
Ca_20899
Cicer arietinum
Ca_20899
I
0.688
GLYMA08G05165
Glycine max
GLYMA08G05165
N
0.686
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.683
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.683
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.683
PRUPE_ppa024819mg
Prunus persica
PRUPE_ppa024819mg
I
0.683
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.683
Ca_09080
Cicer arietinum
Ca_09080
I
0.683
Cla021325
Citrullus lanatus
Cla021325
I
0.683
Pm005710
Prunus mume
Pm005710
I
0.683
29848.m004559
Ricinus communis
29848.m004559
I
0.683
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.683
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.683
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.683
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.683
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.683
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.683
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.683
SapurV1A.0705s0030
Salix purpurea
SapurV1A.0705s0030
I
0.683
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.683
PK02601.1
Cannabis sativa
PK02601.1
I
0.683
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.683
PDK_20s1362511g001
Phoenix dactylifera
PDK_20s1362511g001
I
0.683
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.683
MLOC_12999
Hordeum vulgare
MLOC_12999
N
0.682
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.682
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
0.679
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
0.679
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.679
Cla006313
Citrullus lanatus
Cla006313
N
0.679
Cucsa.251000
Cucumis sativus
Cucsa.251000
N
0.679
mgf001591m
Mimulus guttatus
mgf001591m
I
0.679
mgf014863m
Mimulus guttatus
mgf014863m
I
0.679
RR23
Oryza indica
BGIOSGA005436
I
0.675
RR22
Oryza indica
BGIOSGA022430
I
0.675
BRADI1G47400
Brachypodium distachyon
BRADI1G47400
I
0.675
BRADI3G54120
Brachypodium distachyon
BRADI3G54120
I
0.675
F775_14758
Aegilops tauschii
F775_14758
I
0.675
F775_19079
Aegilops tauschii
F775_19079
I
0.675
GRMZM2G409974
Zea mays
GRMZM2G409974
I
0.675
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.675
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.675
MLOC_11341
Hordeum vulgare
MLOC_11341
I
0.675
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.675
MLOC_76165
Hordeum vulgare
MLOC_76165
I
0.675
OB02G42700
Oryza brachyantha
OB02G42700
I
0.675
OB06G14930
Oryza brachyantha
OB06G14930
I
0.675
OBART06G05360
Oryza barthii
OBART06G05360
I
0.675
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.675
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.675
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.675
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.675
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.675
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.675
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.675
RR23
Oryza sativa
OS02G0796500
I
0.675
RR22
Oryza sativa
OS06G0183100
I
0.675
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.675
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.675
Si006013m.g
Setaria italica
Si006013m.g
I
0.675
Si016546m.g
Setaria italica
Si016546m.g
I
0.675
TCM_036926
Theobroma cacao
TCM_036926
I
0.675
Traes_6BL_790C095EE
Triticum aestivum
Traes_6BL_790C095EE
I
0.675
Traes_6DL_D1C9CE275
Triticum aestivum
Traes_6DL_D1C9CE275
I
0.675
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.675
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.675
Traes_7DS_327FBC2CA
Triticum aestivum
Traes_7DS_327FBC2CA
I
0.675
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.675
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.675
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.675
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.675
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.675
Cla007104
Citrullus lanatus
Cla007104
N
0.672
cassava35050.m1
Manihot esculenta
cassava35050.m1
N
0.672
Cucsa.350850
Cucumis sativus
Cucsa.350850
I
0.671
Eucgr.C04050
Eucalyptus grandis
Eucgr.C04050
I
0.670
TRIUR3_30130
Triticum urartu
TRIUR3_30130
I
0.667
Gorai.009G061000
Gossypium raimondii
Gorai.009G061000
I
0.667
PRUPE_ppa023185mg
Prunus persica
PRUPE_ppa023185mg
N
0.665
30147.m014309
Ricinus communis
30147.m014309
N
0.665
mgf018042m
Mimulus guttatus
mgf018042m
N
0.665
mgf019327m
Mimulus guttatus
mgf019327m
N
0.665
gene13325-v1.0-hybrid
Fragaria vesca
gene13325-v1.0-hybrid
N
0.665
GLYMA09G27151
Glycine max
GLYMA09G27151
N
0.663
MDP0000311914
Malus domestica
MDP0000311914
I
0.662
PK09202.1
Cannabis sativa
PK09202.1
I
0.661