orange1.1g045400m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g045400m.g T288930_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.673 0.699
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.673 0.699
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.673 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g045400m Myb 19 66
orange1.1g045400m Myb 72 117

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.666
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.765
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.663
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.730
MYB55 Arabidopsis thaliana AT4G01680 D 0.673
LAF1 Arabidopsis thaliana AT4G25560 I 0.690
MYB86 Arabidopsis thaliana AT5G26660 I 0.673
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.720
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.664
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.723
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.726
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.684
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.729
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.689
Bo2g156300 Brassica oleracea Bo2g156300 I 0.673
Bo3g023270 Brassica oleracea Bo3g023270 I 0.720
Bo5g009920 Brassica oleracea Bo5g009920 I 0.663
Bo7g095130 Brassica oleracea Bo7g095130 I 0.673
Bo7g110400 Brassica oleracea Bo7g110400 N 0.666
Bo8g077360 Brassica oleracea Bo8g077360 I 0.678
Bo9g004210 Brassica oleracea Bo9g004210 I 0.673
Bo9g010860 Brassica oleracea Bo9g010860 I 0.673
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.685
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.673
Bostr.30057s0004 Boechera stricta Bostr.30057s0004 I 0.661
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.673
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.720
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.690
Bra018027 Brassica rapa Bra018027 I 0.700
Bra029129 Brassica rapa Bra029129 I 0.720
Bra036317 Brassica rapa Bra036317 I 0.673
Bra036588 Brassica rapa Bra036588 I 0.673
BRADI3G46910 Brachypodium distachyon BRADI3G46910 I 0.678
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.706
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.677
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.729
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.714
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.682
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.673
Cagra.2337s0007 Capsella grandiflora Cagra.2337s0007 I 0.677
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.673
Cagra.23907s0010 Capsella grandiflora Cagra.23907s0010 I 0.690
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.673
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.673
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.690
Carubv10018592m.g Capsella rubella Carubv10018592m.g I 0.677
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.682
cassava12868.valid.m1 Manihot esculenta cassava12868.valid.m1 I 0.663
cassava17679.valid.m1 Manihot esculenta cassava17679.valid.m1 I 0.663
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.758
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.836
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.661
cassava3811.m1 Manihot esculenta cassava3811.m1 I 0.665
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.661
Ca_01055 Cicer arietinum Ca_01055 I 0.682
Ca_01072 Cicer arietinum Ca_01072 I 0.673
Ca_03589 Cicer arietinum Ca_03589 I 0.673
Ca_19758 Cicer arietinum Ca_19758 I 0.743
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.703
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.755
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.888
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.661
Ciclev10033327m.g Citrus clementina Ciclev10033327m.g I 0.671
Cla001724 Citrullus lanatus Cla001724 I 0.762
Cla005219 Citrullus lanatus Cla005219 I 0.663
Cla006288 Citrullus lanatus Cla006288 I 0.670
Cla010483 Citrullus lanatus Cla010483 I 0.663
Cla017541 Citrullus lanatus Cla017541 I 0.672
Cla020303 Citrullus lanatus Cla020303 I 0.663
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.663
Cucsa.090310 Cucumis sativus Cucsa.090310 I 0.663
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.663
Cucsa.195180 Cucumis sativus Cucsa.195180 I 0.672
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.751
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.690
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.775
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.673
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.787
Eucgr.K00251 Eucalyptus grandis Eucgr.K00251 N 0.738
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.703
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.778
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.661
e_gw1.211.99.1 Physcomitrella patens e_gw1.211.99.1 I 0.687
e_gw1.24.66.1 Physcomitrella patens e_gw1.24.66.1 I 0.679
F775_08647 Aegilops tauschii F775_08647 I 0.710
F775_26161 Aegilops tauschii F775_26161 I 0.729
AtMYB45 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001377 I 0.661
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.681
fgenesh1_pg.scaffold_189000016 Physcomitrella patens fgenesh1_pg.scaffold_189000016 I 0.679
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.673
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.673
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.720
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.789
gene22961-v1.0-hybrid Fragaria vesca gene22961-v1.0-hybrid I 0.663
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.685
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.673
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.721
GLYMA09G37040 Glycine max GLYMA09G37040 I 0.668
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.722
GLYMA11G14200 Glycine max GLYMA11G14200 I 0.661
GLYMA12G06180 Glycine max GLYMA12G06180 I 0.661
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.666
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.731
GLYMA18G49630 Glycine max GLYMA18G49630 I 0.668
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.673
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.673
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.722
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.765
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.790
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.668
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.693
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.693
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.685
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.729
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.680
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.710
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.709
GSMUA_Achr4G29410_001 Musa acuminata GSMUA_Achr4G29410_001 I 0.695
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.708
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I 0.681
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.689
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.673
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.701
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.810
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.730
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.777
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.661
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.787
MDP0000135594 Malus domestica MDP0000135594 I 0.676
MDP0000152575 Malus domestica MDP0000152575 I 0.777
MDP0000204495 Malus domestica MDP0000204495 I 0.661
MDP0000601420 Malus domestica MDP0000601420 I 0.663
MDP0000653903 Malus domestica MDP0000653903 I 0.663
MDP0000722954 Malus domestica MDP0000722954 I 0.661
MDP0000896053 Malus domestica MDP0000896053 I 0.763
MDP0000932804 Malus domestica MDP0000932804 I 0.663
mgf005459m Mimulus guttatus mgf005459m I 0.669
mgf018105m Mimulus guttatus mgf018105m I 0.669
mgf024107m Mimulus guttatus mgf024107m I 0.682
mgf024114m Mimulus guttatus mgf024114m I 0.733
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.710
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.693
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.673
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.749
MTR_4g065017 Medicago truncatula MTR_4g065017 I 0.661
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.703
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.703
OB02G29290 Oryza brachyantha OB02G29290 I 0.723
OB02G32950 Oryza brachyantha OB02G32950 I 0.726
OB02G35920 Oryza brachyantha OB02G35920 I 0.673
OB04G22310 Oryza brachyantha OB04G22310 I 0.729
OB04G26810 Oryza brachyantha OB04G26810 I 0.705
OB07G21090 Oryza brachyantha OB07G21090 I 0.702
OBART02G21860 Oryza barthii OBART02G21860 I 0.723
OBART02G25570 Oryza barthii OBART02G25570 I 0.726
OBART02G28790 Oryza barthii OBART02G28790 I 0.664
OBART04G14990 Oryza barthii OBART04G14990 I 0.729
OBART04G19730 Oryza barthii OBART04G19730 I 0.689
OBART04G23680 Oryza barthii OBART04G23680 I 0.684
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.723
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.726
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.664
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.689
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.684
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.664
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.723
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.726
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.664
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.689
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.684
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.723
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.726
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.664
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.729
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.689
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.684
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.726
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.673
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.689
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.684
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.661
orange1.1g039016m.g Citrus sinensis orange1.1g039016m.g I 0.671
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.729
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.689
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.684
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.689
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.723
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.735
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.664
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.729
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.689
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.684
OS02G0695200 Oryza sativa OS02G0695200 I 0.664
OS04G0461000 Oryza sativa OS04G0461000 I 0.729
OS04G0532800 Oryza sativa OS04G0532800 I 0.689
OS04G0594100 Oryza sativa OS04G0594100 I 0.684
Pavir.Ab02021 Panicum virgatum Pavir.Ab02021 I 0.702
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.696
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.680
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.680
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.675
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.774
PK03176.1 Cannabis sativa PK03176.1 I 0.663
PK13930.1 Cannabis sativa PK13930.1 I 0.661
PK18276.1 Cannabis sativa PK18276.1 I 0.763
PK26207.1 Cannabis sativa PK26207.1 I 0.661
Pm003267 Prunus mume Pm003267 I 0.663
Pm015547 Prunus mume Pm015547 I 0.667
Pm019344 Prunus mume Pm019344 I 0.791
Pm028882 Prunus mume Pm028882 I 0.662
Pm030488 Prunus mume Pm030488 I 0.667
POPTR_0009s05860 Populus trichocarpa POPTR_0009s05860 I 0.661
POPTR_0010s17300 Populus trichocarpa POPTR_0010s17300 I 0.662
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.829
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.800
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.661
PRUPE_ppa019718mg Prunus persica PRUPE_ppa019718mg I 0.663
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.791
SapurV1A.0063s0570 Salix purpurea SapurV1A.0063s0570 I 0.662
SapurV1A.0534s0230 Salix purpurea SapurV1A.0534s0230 I 0.661
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.779
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.777
Sb01g034270 Sorghum bicolor Sb01g034270 I 0.683
Sb04g024000 Sorghum bicolor Sb04g024000 I 0.702
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.673
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.703
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.717
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.676
Si010352m.g Setaria italica Si010352m.g I 0.729
Si010384m.g Setaria italica Si010384m.g I 0.684
Si012304m.g Setaria italica Si012304m.g I 0.680
Si017851m.g Setaria italica Si017851m.g I 0.702
Si017947m.g Setaria italica Si017947m.g I 0.705
Solyc03g025870.2 Solanum lycopersicum Solyc03g025870.2 I 0.741
Solyc10g044680.1 Solanum lycopersicum Solyc10g044680.1 I 0.671
TCM_011659 Theobroma cacao TCM_011659 I 0.663
TCM_015157 Theobroma cacao TCM_015157 I 0.769
TCM_026853 Theobroma cacao TCM_026853 I 0.663
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.673
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.685
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.711
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.673
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.693
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.714
Traes_2AL_AF9357B4C Triticum aestivum Traes_2AL_AF9357B4C N 0.673
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.714
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.669
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.693
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.714
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.693
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.684
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.729
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.710
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.710
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.710
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.693
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.729
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.710
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.661
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.664
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.661
VIT_16s0050g00050 Vitis vinifera VIT_16s0050g00050 I 0.758