Pavir.Bb00243 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Bb00243 T289027_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb00243.1.p Myb 154 175
Pavir.Bb00243.1.p Myb 209 246
Pavir.Bb00243.1.p Myb 253 300
Pavir.Bb00243.1.p Myb 306 351
Pavir.Bb00243.1.p Myb 358 404
Pavir.Bb00243.1.p Myb 411 454
Pavir.Bb00243.2.p Myb 154 175
Pavir.Bb00243.2.p Myb 209 246
Pavir.Bb00243.2.p Myb 253 300
Pavir.Bb00243.2.p Myb 306 351
Pavir.Bb00243.2.p Myb 358 404
Pavir.Bb00243.2.p Myb 411 454

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ba03827 Panicum virgatum Pavir.Ba03827 N 0.901
Si028919m.g Setaria italica Si028919m.g N 0.832
BGIOSGA024846 Oryza indica BGIOSGA024846 N 0.759
ORUFI07G02320 Oryza rufipogon ORUFI07G02320 N 0.759
ONIVA04G19340 Oryza nivara ONIVA04G19340 N 0.756
LPERR07G02310 Leersia perrieri LPERR07G02310 N 0.755
OGLUM07G14260 Oryza glumaepatula OGLUM07G14260 N 0.753
OLONG_009970 Oryza longistaminata OLONG_009970 N 0.753
OMERI01G11970 Oryza meridionalis OMERI01G11970 N 0.753
OBART07G02450 Oryza barthii OBART07G02450 N 0.751
ORGLA07G0021600 Oryza glaberrima ORGLA07G0021600 N 0.751
OB07G12010 Oryza brachyantha OB07G12010 N 0.748
GRMZM2G051793 Zea mays GRMZM2G051793 N 0.739
OPUNC07G02500 Oryza punctata OPUNC07G02500 N 0.733