Pavir.Gb01230 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Gb01230 T289232_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb01230.1.p Myb 42 101
Pavir.Gb01230.2.p Myb 42 101

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb06g020670 Sorghum bicolor Sb06g020670 N 0.902
Pavir.Ib01088 Panicum virgatum Pavir.Ib01088 N 0.902
Pavir.J03341 Panicum virgatum Pavir.J03341 N 0.813
LPERR04G13310 Leersia perrieri LPERR04G13310 N 0.811
BGIOSGA016635 Oryza indica BGIOSGA016635 N 0.778
OGLUM04G16630 Oryza glumaepatula OGLUM04G16630 N 0.778
OMERI04G13990 Oryza meridionalis OMERI04G13990 N 0.778
ONIVA04G14730 Oryza nivara ONIVA04G14730 N 0.778
OPUNC04G14460 Oryza punctata OPUNC04G14460 N 0.778
ORGLA04G0137200 Oryza glaberrima ORGLA04G0137200 N 0.778
ORUFI04G18090 Oryza rufipogon ORUFI04G18090 N 0.778
BRADI5G13900 Brachypodium distachyon BRADI5G13900 N 0.712
Traes_2AL_73E4240F0 Triticum aestivum Traes_2AL_73E4240F0 N 0.712
Traes_2BL_692BF6383 Triticum aestivum Traes_2BL_692BF6383 N 0.712
TRIUR3_08260 Triticum urartu TRIUR3_08260 N 0.712
F775_21073 Aegilops tauschii F775_21073 N 0.691
mgf020565m Mimulus guttatus mgf020565m N 0.670