CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.1016s0030
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.1016s0030
T289824_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD
HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.867
0.925
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.867
0.925
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.867
0.925
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.794
0.892
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.794
0.892
MYB46
M00877_2.00
Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN
PBM
Franco-Zorrilla et al.(2014)
MYB46
0.683
0.763
MYB46
M11046_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB46_Q6
0.683
0.763
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC
GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.674
0.710
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.674
0.710
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.674
0.710
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.671
0.688
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.671
0.688
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1016s0030.1.p
Myb
14
61
KGLWSPEEDEKLLNYITKHGHGCWSSVPKLADLQRCGKSCRLRWINYL
SapurV1A.1016s0030.1.p
Myb
67
112
RGAFSQQEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCI
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
730 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R011038
Aptenodytes forsteri
Afo_R011038
I
Alligator_sinensis_CCG004416.1
Alligator sinensis
Alligator_sinensis_CCG004416.1
I
Brh_R011978
Buceros rhinoceros
Brh_R011978
I
ENSAMXG00000020530
Astyanax mexicanus
ENSAMXG00000020530
I
ENSAPLG00000011895
Anas platyrhynchos
ENSAPLG00000011895
I
ENSFALG00000003252
Ficedula albicollis
ENSFALG00000003252
I
ENSMEUG00000008494
Macropus eugenii
ENSMEUG00000008494
I
esr2
Xenopus tropicalis
XB-GENE-486256
I
ESR2
Anolis carolinensis
ENSACAG00000015814
I
ESR2
Taeniopygia guttata
ENSTGUG00000012942
I
ESR2
Ochotona princeps
ENSOPRG00000005700
I
ESR2
Monodelphis domestica
ENSMODG00000009240
I
ESR2
Meleagris gallopavo
ENSMGAG00000013507
I
ESR2
Gallus gallus
ENSGALG00000011801
I
ESR2
Equus caballus
ENSECAG00000024947
I
Gfo_R006810
Geospiza fortis
Gfo_R006810
I
Ogr05291
Ophisaurus gracilis
Ogr05291
I
Pvit_18910
Pogona vitticeps
Pvit_18910
I
Tal_R004266
Tyto alba
Tal_R004266
I