CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004420m.g
(
Eutrema salsugineum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Thhalv10004420m.g
T289951_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004420m
Myb
315
371
RLFWTSEEEEMLKVGVEKFAPEAKKNMPWKKILEMGEKVFHETRTPSDLKDKWRNMN
Links
Other
Myb/SANT
family TFs
Other
Eutrema salsugineum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0154s0026
Capsella grandiflora
Cagra.0154s0026
N
0.721
Carubv10000776m.g
Capsella rubella
Carubv10000776m.g
N
0.721
Bo3g002160
Brassica oleracea
Bo3g002160
N
0.691
Bostr.2128s0072
Boechera stricta
Bostr.2128s0072
N
0.680
Bra037494
Brassica rapa
Bra037494
N
0.665
TRFL10
Arabidopsis lyrata
fgenesh2_kg.6__290__AT5G03780.1
N
0.665
Bo9g009350
Brassica oleracea
Bo9g009350
N
0.663
Bra036179
Brassica rapa
Bra036179
N
0.663