Thhalv10014613m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10014613m.g T290056_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.836 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10014613m Myb 3 51
Thhalv10014613m Myb 98 145

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.849
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.849
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.849
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.836
Bo3g002960 Brassica oleracea Bo3g002960 I 0.830
Bo9g178980 Brassica oleracea Bo9g178980 I 0.823
Bra009432 Brassica rapa Bra009432 I 0.823
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.823
Bra005818 Brassica rapa Bra005818 I 0.820
Bra028780 Brassica rapa Bra028780 I 0.757
Bo2g006670 Brassica oleracea Bo2g006670 I 0.756
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.741
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.725
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.725
Ca_05454 Cicer arietinum Ca_05454 I 0.711
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.701
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.687
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.680
Gorai.006G118200 Gossypium raimondii Gorai.006G118200 I 0.676
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.672
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.672
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.671
MDP0000289018 Malus domestica MDP0000289018 I 0.662