Thhalv10024866m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10024866m.g T290140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR10
M02702_2.00 		Arabidopsis thaliana
AGATHYKN
NMRDATCT		 SELEX
Mathelier et al.(2014)
MA0121.1 		0.875 0.979
ARR10
M11045_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ARR10_01 		0.875 0.979
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.684 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10024866m Myb 189 239

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARR10 Arabidopsis lyrata Al_scaffold_0007_907 I 0.875
ARR10 Arabidopsis thaliana AT4G31920 D 0.875
Bostr.7867s1047 Boechera stricta Bostr.7867s1047 I 0.875
Cagra.3807s0064 Capsella grandiflora Cagra.3807s0064 I 0.844
Carubv10004554m.g Capsella rubella Carubv10004554m.g I 0.844
Bo7g115520 Brassica oleracea Bo7g115520 I 0.813
Bra023972 Brassica rapa Bra023972 I 0.805
Ca_09080 Cicer arietinum Ca_09080 I 0.797
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.797
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.797
Bo1g010830 Brassica oleracea Bo1g010830 I 0.762
29848.m004559 Ricinus communis 29848.m004559 I 0.737
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.733
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.733
AMTR_s00019p00208460 Amborella trichopoda AMTR_s00019p00208460 I 0.712
Bo7g104190 Brassica oleracea Bo7g104190 I 0.711
Bra012743 Brassica rapa Bra012743 I 0.711
PK02601.1 Cannabis sativa PK02601.1 I 0.708
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.704
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.704
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.700
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.700
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.700
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.700
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.700
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.700
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.697
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.697
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.697
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.691
ARR1 Arabidopsis thaliana AT3G16857 D 0.684
Bo3g068550 Brassica oleracea Bo3g068550 I 0.684
Bo5g123620 Brassica oleracea Bo5g123620 I 0.684
Bra001643 Brassica rapa Bra001643 I 0.684
Bra022183 Brassica rapa Bra022183 I 0.684
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.684
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.684
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.684
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.678
Traes_6AL_9C9D677D4 Triticum aestivum Traes_6AL_9C9D677D4 I 0.678
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.672
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.669
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.669
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.669
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.667
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.666