CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK01153.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK01153.1
T290333_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.683
0.763
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.683
0.763
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.683
0.763
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY
RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.678
0.806
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.678
0.785
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.678
0.785
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.673
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK01153.1
Myb
13
59
KGSWSPQEDETLKKLVEQHGPRNWSVISTGIIGRSGKSCRLRWCNQL
PK01153.1
Myb
65
110
HRPFTPEEDSMIIQAHAAHGNKWATIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.814
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.811
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.810
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.810
MDP0000298689
Malus domestica
MDP0000298689
I
0.804
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.802
TCM_042474
Theobroma cacao
TCM_042474
I
0.796
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.795
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.795
Cla004431
Citrullus lanatus
Cla004431
I
0.793
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.791
29814.m000736
Ricinus communis
29814.m000736
I
0.786
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.786
Pm018951
Prunus mume
Pm018951
I
0.778
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.777
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.777
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.777
Ca_12468
Cicer arietinum
Ca_12468
I
0.775
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.759
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.755
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.754
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.754
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.743
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
0.741
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.732
Aquca_007_00776
Aquilegia coerulea
Aquca_007_00776
I
0.729
Ciclev10026107m.g
Citrus clementina
Ciclev10026107m.g
I
0.729
orange1.1g021071m.g
Citrus sinensis
orange1.1g021071m.g
I
0.729
mgf020432m
Mimulus guttatus
mgf020432m
I
0.727
Ca_01522
Cicer arietinum
Ca_01522
I
0.726
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.723
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.722
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
0.721
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.720
Cla020946
Citrullus lanatus
Cla020946
I
0.720
Pm005332
Prunus mume
Pm005332
I
0.720
MDP0000463846
Malus domestica
MDP0000463846
I
0.720
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.718
Bra032176
Brassica rapa
Bra032176
I
0.717
30170.m013698
Ricinus communis
30170.m013698
I
0.717
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.717
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.717
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.717
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.717
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.717
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.717
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.717
PK17282.1
Cannabis sativa
PK17282.1
I
0.717
MDP0000275800
Malus domestica
MDP0000275800
I
0.716
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.715
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.713
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
0.712
Bra007186
Brassica rapa
Bra007186
I
0.710
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.710
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.709
MYB25
Arabidopsis thaliana
AT2G39880
I
0.708
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
0.708
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.707
e_gw1.3.530.1
Coccomyxa subellipsoidea C169
e_gw1.3.530.1
N
0.707
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
0.707
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
0.707
e_gw1.3.545.1
Chlorella vulgaris
e_gw1.3.545.1
N
0.707
Cla022947
Citrullus lanatus
Cla022947
I
0.706
Cucsa.395890
Cucumis sativus
Cucsa.395890
I
0.706
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.705
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.705
MTR_5g016510
Medicago truncatula
MTR_5g016510
I
0.705
PGSC0003DMG400024983
Solanum tuberosum
PGSC0003DMG400024983
I
0.705
Solyc02g092930.1
Solanum lycopersicum
Solyc02g092930.1
I
0.705
VIT_18s0001g09850
Vitis vinifera
VIT_18s0001g09850
I
0.705
cassava2215.valid.m1
Manihot esculenta
cassava2215.valid.m1
I
0.705
cassava43120.valid.m1
Manihot esculenta
cassava43120.valid.m1
I
0.705
Gorai.007G218100
Gossypium raimondii
Gorai.007G218100
I
0.705
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.705
mgf023922m
Mimulus guttatus
mgf023922m
I
0.704
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.704
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
0.703
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
0.703
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
0.703
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
0.703
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.703
SapurV1A.0167s0310
Salix purpurea
SapurV1A.0167s0310
I
0.703
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
0.703
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
0.703
GLYMA17G35620
Glycine max
GLYMA17G35620
I
0.702
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.702
mgf002573m
Mimulus guttatus
mgf002573m
I
0.702
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.701
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.701
Ca_02182
Cicer arietinum
Ca_02182
I
0.701
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.701
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
0.701
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.701
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.700
SapurV1A.0339s0020
Salix purpurea
SapurV1A.0339s0020
I
0.699
Bo3g153550
Brassica oleracea
Bo3g153550
I
0.696
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.696
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
0.696
PRUPE_ppa008450mg
Prunus persica
PRUPE_ppa008450mg
I
0.695
TCM_000696
Theobroma cacao
TCM_000696
I
0.695
29970.m000987
Ricinus communis
29970.m000987
I
0.695
gene24027-v1.0-hybrid
Fragaria vesca
gene24027-v1.0-hybrid
I
0.695
Gorai.007G055600
Gossypium raimondii
Gorai.007G055600
I
0.695
MDP0000196986
Malus domestica
MDP0000196986
I
0.695
MDP0000232454
Malus domestica
MDP0000232454
I
0.695
chr5.CM0096.100.nc
Lotus japonicus
chr5.CM0096.100.nc
I
0.695
GRMZM2G369799
Zea mays
GRMZM2G369799
I
0.694
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.694
Pavir.Ca02945
Panicum virgatum
Pavir.Ca02945
I
0.694
Pavir.Cb00156
Panicum virgatum
Pavir.Cb00156
I
0.694
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.693
GLYMA14G09540
Glycine max
GLYMA14G09540
I
0.693
PGSC0003DMG400003316
Solanum tuberosum
PGSC0003DMG400003316
I
0.693
Solyc04g078420.1
Solanum lycopersicum
Solyc04g078420.1
I
0.693
Cla014191
Citrullus lanatus
Cla014191
I
0.693
30170.m013927
Ricinus communis
30170.m013927
I
0.693
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
0.693
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.693
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.693
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.693
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
0.693
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.693
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.693
Bo4g151410
Brassica oleracea
Bo4g151410
I
0.692
mgf014089m
Mimulus guttatus
mgf014089m
I
0.692
TCM_007138
Theobroma cacao
TCM_007138
I
0.691
Cla021015
Citrullus lanatus
Cla021015
I
0.691
MYB109
Arabidopsis thaliana
AT3G55730
I
0.690
Thhalv10025742m.g
Eutrema salsugineum
Thhalv10025742m.g
I
0.690
Bra010593
Brassica rapa
Bra010593
I
0.689
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.689
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.688
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
0.688
PK16550.1
Cannabis sativa
PK16550.1
I
0.688
GLYMA01G39740
Glycine max
GLYMA01G39740
I
0.687
GLYMA11G05550
Glycine max
GLYMA11G05550
I
0.687
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.687
TCM_021796
Theobroma cacao
TCM_021796
I
0.687
Pm002576
Prunus mume
Pm002576
I
0.687
evm.TU.supercontig_6.98
Carica papaya
evm.TU.supercontig_6.98
I
0.687
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.687
Lus10030336.g
Linum usitatissimum
Lus10030336.g
I
0.687
chr2.CM0250.240.nd
Lotus japonicus
chr2.CM0250.240.nd
I
0.687
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.686
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.686
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.685
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.685
Cla006872
Citrullus lanatus
Cla006872
I
0.685
Cucsa.073130
Cucumis sativus
Cucsa.073130
I
0.685
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.685
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
0.684
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.684
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.684
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.684
MDP0000203733
Malus domestica
MDP0000203733
I
0.684
MDP0000319124
Malus domestica
MDP0000319124
I
0.684
MDP0000478512
Malus domestica
MDP0000478512
I
0.684
MYB44
Arabidopsis thaliana
AT5G67300
D
0.683
Bo7g063830
Brassica oleracea
Bo7g063830
I
0.683
Bo7g118450
Brassica oleracea
Bo7g118450
I
0.683
Bra012149
Brassica rapa
Bra012149
I
0.683
ATMYBR1
Arabidopsis lyrata
scaffold_803378.1
I
0.683
Bostr.0568s0154
Boechera stricta
Bostr.0568s0154
I
0.683
Cagra.0342s0017
Capsella grandiflora
Cagra.0342s0017
I
0.683
Carubv10027659m.g
Capsella rubella
Carubv10027659m.g
I
0.683
Thhalv10004676m.g
Eutrema salsugineum
Thhalv10004676m.g
I
0.683
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.682
GLYMA04G04490
Glycine max
GLYMA04G04490
I
0.680
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.679
AtMYB70
Arabidopsis thaliana
AT2G23290
D
0.678
AtMYB70
Arabidopsis lyrata
fgenesh2_kg.4__260__AT2G23290.1
I
0.678
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.678
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.678
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.678
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.678
Bostr.27895s0157
Boechera stricta
Bostr.27895s0157
I
0.678
Carubv10023692m.g
Capsella rubella
Carubv10023692m.g
I
0.678
Lus10010260.g
Linum usitatissimum
Lus10010260.g
I
0.678
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.678
PK28565.1
Cannabis sativa
PK28565.1
D
0.678
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.676
Pm005220
Prunus mume
Pm005220
I
0.676
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.676
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.676
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.676
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.676
MDP0000894463
Malus domestica
MDP0000894463
I
0.676
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.675
VIT_07s0129g01050
Vitis vinifera
VIT_07s0129g01050
I
0.675
Thhalv10000438m.g
Eutrema salsugineum
Thhalv10000438m.g
I
0.675
Bo2g167960
Brassica oleracea
Bo2g167960
I
0.674
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.674
MYB73
Arabidopsis thaliana
AT4G37260
D
0.673
Bo1g004900
Brassica oleracea
Bo1g004900
I
0.673
Bra011749
Brassica rapa
Bra011749
I
0.673
Bostr.7867s1585
Boechera stricta
Bostr.7867s1585
I
0.673
Cagra.1232s0025
Capsella grandiflora
Cagra.1232s0025
I
0.673
Carubv10007638m.g
Capsella rubella
Carubv10007638m.g
I
0.673
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.672
OB09G10200
Oryza brachyantha
OB09G10200
I
0.672
OBART09G00310
Oryza barthii
OBART09G00310
I
0.672
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.672
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.672
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.672
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.672
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.672
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.672
OS09G0106700
Oryza sativa
OS09G0106700
I
0.672
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.672
Si032789m.g
Setaria italica
Si032789m.g
I
0.672
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.672
mgf018580m
Mimulus guttatus
mgf018580m
I
0.671
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.671
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
0.670
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.669
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.669
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.668
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.668
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.667
Gorai.009G276400
Gossypium raimondii
Gorai.009G276400
I
0.666
POPTR_0009s09890
Populus trichocarpa
POPTR_0009s09890
I
0.665
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.664
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.664
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.664
BGIOSGA000003
Oryza indica
BGIOSGA000003
N
0.663
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.663
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.663
OBART01G45880
Oryza barthii
OBART01G45880
N
0.663
OGLUM01G50230
Oryza glumaepatula
OGLUM01G50230
N
0.663
ONIVA01G52120
Oryza nivara
ONIVA01G52120
N
0.663
OPUNC01G44800
Oryza punctata
OPUNC01G44800
N
0.663
ORGLA01G0396300
Oryza glaberrima
ORGLA01G0396300
N
0.663
ORUFI01G49370
Oryza rufipogon
ORUFI01G49370
N
0.663
OS01G0977300
Oryza sativa
OS01G0977300
N
0.663
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.663
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.663
Si022959m.g
Setaria italica
Si022959m.g
I
0.662
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.662
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
0.661
Gorai.002G009300
Gossypium raimondii
Gorai.002G009300
I
0.661