CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr5.CM0071.390.nd
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
chr5.CM0071.390.nd
T290725_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr5.CM0071.390.nd
Myb
1
24
WSAIAAKLPGRTDHEIKNVWHTHL
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB3
Arabidopsis thaliana
AT1G22640
D
0.684
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
0.666
SapurV1A.0021s0930
Salix purpurea
SapurV1A.0021s0930
I
0.678
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.684
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.700
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.762
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.686
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.809
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.679
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.693
GLYMA14G10483
Glycine max
GLYMA14G10483
I
0.662
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.694
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.781
TCM_041010
Theobroma cacao
TCM_041010
I
0.782
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.678
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.700
Bostr.13129s0196
Boechera stricta
Bostr.13129s0196
I
0.759
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.794
MDP0000879675
Malus domestica
MDP0000879675
N
0.684
MDP0000911051
Malus domestica
MDP0000911051
N
0.693
mgf023771m
Mimulus guttatus
mgf023771m
N
0.850
MDP0000158409
Malus domestica
MDP0000158409
N
0.707
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.697
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
0.678
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.782
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
0.710
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.795
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
0.795
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
0.709
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
0.790
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
0.790
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
0.756
PK00358.1
Cannabis sativa
PK00358.1
N
0.685
PK21717.1
Cannabis sativa
PK21717.1
N
0.762
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.845
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
0.790
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.795
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
0.795
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
0.802
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.790
LjSGA_064890.1.1
Lotus japonicus
LjSGA_064890.1.1
N
0.688
PDK_20s1405001g001
Phoenix dactylifera
PDK_20s1405001g001
N
0.668
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.795
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
0.678
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
0.693
AMTR_s00087p00039380
Amborella trichopoda
AMTR_s00087p00039380
N
0.669
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
0.672
Bo4g198650
Brassica oleracea
Bo4g198650
N
0.685
Bo8g104180
Brassica oleracea
Bo8g104180
N
0.707
Bra024685
Brassica rapa
Bra024685
N
0.701
F775_42755
Aegilops tauschii
F775_42755
N
0.708
MLOC_71332
Hordeum vulgare
MLOC_71332
N
0.678
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
0.775
OB06G28240
Oryza brachyantha
OB06G28240
N
0.782
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
0.762
OS04G0517100
Oryza sativa
OS04G0517100
N
0.739
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.789
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.788
Solyc03g098270.1
Solanum lycopersicum
Solyc03g098270.1
N
0.701
mgf020736m
Mimulus guttatus
mgf020736m
N
0.708
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
0.678
Traes_6AL_C0A2B4F041
Triticum aestivum
Traes_6AL_C0A2B4F041
N
0.663
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
0.781
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.774
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.832
Ca_10215
Cicer arietinum
Ca_10215
N
0.748
Pm000007
Prunus mume
Pm000007
N
0.781
Pm015551
Prunus mume
Pm015551
N
0.676
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.815
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.704
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
0.798
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
0.708
mg021480m
Mimulus guttatus
mg021480m
N
0.666
mgf017705m
Mimulus guttatus
mgf017705m
N
0.686
mgf018056m
Mimulus guttatus
mgf018056m
N
0.755