CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT02E24.60.nc
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
LjT02E24.60.nc
T291025_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.666
0.710
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT02E24.60.nc
Myb
14
61
RGVWTAQEDQILRDYVNLHGQGKWRNLPQSAGLKRCGKSCRLRWLNYL
LjT02E24.60.nc
Myb
67
112
RGNISTDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNL
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.876
LjT02E24.130.nc
Lotus japonicus
LjT02E24.130.nc
I
0.864
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.807
Ca_03154
Cicer arietinum
Ca_03154
I
0.790
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.781
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.781
Eucgr.C03152
Eucalyptus grandis
Eucgr.C03152
N
0.780
Eucgr.C03153
Eucalyptus grandis
Eucgr.C03153
N
0.780
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.773
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.771
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.770
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.768
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.768
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.768
TCM_037559
Theobroma cacao
TCM_037559
I
0.767
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.762
TCM_037376
Theobroma cacao
TCM_037376
I
0.762
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.762
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.759
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.759
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.759
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.759
Pm005570
Prunus mume
Pm005570
I
0.759
MDP0000031172
Malus domestica
MDP0000031172
I
0.759
MDP0000210851
Malus domestica
MDP0000210851
I
0.759
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.759
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.757
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.757
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.757
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.757
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.757
Si038905m.g
Setaria italica
Si038905m.g
I
0.756
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.756
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.756
PK16315.1
Cannabis sativa
PK16315.1
I
0.756
TCM_004509
Theobroma cacao
TCM_004509
I
0.753
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.752
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.752
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.748
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.747
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.746
Eucgr.F03176
Eucalyptus grandis
Eucgr.F03176
I
0.746
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.745
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.745
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.745
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.741
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.740
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.740
TCM_000535
Theobroma cacao
TCM_000535
I
0.740
TCM_010778
Theobroma cacao
TCM_010778
I
0.740
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.740
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.740
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.738
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.738
TCM_037379
Theobroma cacao
TCM_037379
I
0.738
Pm013279
Prunus mume
Pm013279
I
0.738
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.738
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.737
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.736
TCM_037377
Theobroma cacao
TCM_037377
I
0.736
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.736
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.735
evm.TU.supercontig_25.114
Carica papaya
evm.TU.supercontig_25.114
I
0.734
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.733
Pm005572
Prunus mume
Pm005572
I
0.733
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.731
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.730
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.730
VIT_04s0008g01840
Vitis vinifera
VIT_04s0008g01840
I
0.729
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.729
MDP0000437717
Malus domestica
MDP0000437717
I
0.728
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.727
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.727
Pm027047
Prunus mume
Pm027047
I
0.726
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.725
MDP0000887107
Malus domestica
MDP0000887107
I
0.723
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.722
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.722
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.721
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.721
Pm005571
Prunus mume
Pm005571
I
0.721
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.721
MDP0000184538
Malus domestica
MDP0000184538
I
0.721
TT2
Arabidopsis thaliana
AT5G35550
I
0.719
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.719
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.719
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.719
Pm027045
Prunus mume
Pm027045
I
0.719
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.719
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.719
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.719
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.719
TCM_037555
Theobroma cacao
TCM_037555
I
0.718
evm.TU.supercontig_28.71
Carica papaya
evm.TU.supercontig_28.71
I
0.718
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.718
MDP0000140609
Malus domestica
MDP0000140609
I
0.718
PDK_20s13009436g002
Phoenix dactylifera
PDK_20s13009436g002
I
0.718
Lus10033473.g
Linum usitatissimum
Lus10033473.g
I
0.717
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.716
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.716
Bra035532
Brassica rapa
Bra035532
I
0.716
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.716
OB03G30160
Oryza brachyantha
OB03G30160
I
0.715
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.715
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.714
PRUPE_ppa017136mg
Prunus persica
PRUPE_ppa017136mg
I
0.713
Pm027048
Prunus mume
Pm027048
I
0.713
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.712
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.712
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.711
TCM_029121
Theobroma cacao
TCM_029121
I
0.708
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.708
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.705
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.705
Sb10g006700
Sorghum bicolor
Sb10g006700
I
0.705
VIT_04s0008g01830
Vitis vinifera
VIT_04s0008g01830
N
0.705
OB06G16110
Oryza brachyantha
OB06G16110
I
0.703
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.703
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.703
28226.m000839
Ricinus communis
28226.m000839
I
0.703
GSMUA_Achr4G21700_001
Musa acuminata
GSMUA_Achr4G21700_001
I
0.700
MDP0000318013
Malus domestica
MDP0000318013
I
0.700
GLYMA20G32510
Glycine max
GLYMA20G32510
I
0.699
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.695
Eucgr.J02819
Eucalyptus grandis
Eucgr.J02819
N
0.695
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.695
MTR_8g020490
Medicago truncatula
MTR_8g020490
I
0.694
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.694
OGLUM03G21860
Oryza glumaepatula
OGLUM03G21860
I
0.692
29739.m003784
Ricinus communis
29739.m003784
I
0.692
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
0.690
Gorai.003G021100
Gossypium raimondii
Gorai.003G021100
I
0.690
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.689
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.688
Eucgr.C03554
Eucalyptus grandis
Eucgr.C03554
I
0.687
GSMUA_Achr2G17960_001
Musa acuminata
GSMUA_Achr2G17960_001
N
0.686
evm.TU.supercontig_124.57
Carica papaya
evm.TU.supercontig_124.57
I
0.686
GSMUA_Achr8G14540_001
Musa acuminata
GSMUA_Achr8G14540_001
N
0.685
GLYMA11G03770
Glycine max
GLYMA11G03770
N
0.683
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
0.683
Eucgr.F03175
Eucalyptus grandis
Eucgr.F03175
I
0.682
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.682
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.680
gene12738-v1.0-hybrid
Fragaria vesca
gene12738-v1.0-hybrid
I
0.680
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.678
Pm005573
Prunus mume
Pm005573
I
0.678
Gorai.007G001800
Gossypium raimondii
Gorai.007G001800
I
0.678
Eucgr.J02816
Eucalyptus grandis
Eucgr.J02816
I
0.677
Eucgr.J02817
Eucalyptus grandis
Eucgr.J02817
I
0.677
GSMUA_Achr11G23500_001
Musa acuminata
GSMUA_Achr11G23500_001
N
0.675
Eucgr.F02583
Eucalyptus grandis
Eucgr.F02583
I
0.675
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.675
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.675
Si008089m.g
Setaria italica
Si008089m.g
I
0.673
cassava24925.valid.m1
Manihot esculenta
cassava24925.valid.m1
I
0.672
mgf006108m
Mimulus guttatus
mgf006108m
I
0.672
evm.TU.supercontig_6.280
Carica papaya
evm.TU.supercontig_6.280
I
0.672
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.670
cassava2597.m1
Manihot esculenta
cassava2597.m1
I
0.669
MYB23
Arabidopsis thaliana
AT5G40330
D
0.666
Bra025589
Brassica rapa
Bra025589
I
0.666
POPTR_0006s29080
Populus trichocarpa
POPTR_0006s29080
I
0.666
VIT_18s0117g00200
Vitis vinifera
VIT_18s0117g00200
I
0.666
28154.m000040
Ricinus communis
28154.m000040
I
0.666
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
0.666
Bostr.7200s0005
Boechera stricta
Bostr.7200s0005
I
0.666
Cagra.3160s0003
Capsella grandiflora
Cagra.3160s0003
I
0.666
Carubv10005698m.g
Capsella rubella
Carubv10005698m.g
I
0.666
Gorai.001G020500
Gossypium raimondii
Gorai.001G020500
N
0.666
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.666
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.665
Cla011528
Citrullus lanatus
Cla011528
I
0.665
gene07418-v1.0-hybrid
Fragaria vesca
gene07418-v1.0-hybrid
N
0.665
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.664
Ciclev10009521m.g
Citrus clementina
Ciclev10009521m.g
N
0.664
gene15383-v1.0-hybrid
Fragaria vesca
gene15383-v1.0-hybrid
N
0.664
orange1.1g028922m.g
Citrus sinensis
orange1.1g028922m.g
N
0.664
PK23594.1
Cannabis sativa
PK23594.1
I
0.664
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.663
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.662
Gorai.009G288900
Gossypium raimondii
Gorai.009G288900
I
0.662
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.662
PK21058.1
Cannabis sativa
PK21058.1
I
0.662
TCM_012057
Theobroma cacao
TCM_012057
I
0.661