CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1388491g004
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1388491g004
T291127_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.722
0.785
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.719
0.785
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY
RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.669
0.774
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.669
0.774
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1388491g004
Myb
14
61
KGRWSAEEDELLVKYIKAHGEGSWRSLPKNAGLSRCGKSCRLRWVNYL
PDK_20s1388491g004
Myb
67
112
RGNITQEEEETMIKLHASLGNRWSAIAEHLPGRTDNEIKNYWNSHI
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.817
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.817
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.817
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.806
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.805
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.802
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.802
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.799
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.799
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.796
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.793
Cla017646
Citrullus lanatus
Cla017646
I
0.787
MDP0000119725
Malus domestica
MDP0000119725
I
0.787
MDP0000607330
Malus domestica
MDP0000607330
I
0.787
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.783
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.782
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.782
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.781
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.780
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.778
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.776
mgf024278m
Mimulus guttatus
mgf024278m
I
0.776
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.771
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.770
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.769
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.769
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.769
Ca_03498
Cicer arietinum
Ca_03498
I
0.768
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.767
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.766
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.766
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.764
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.764
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.764
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.763
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.758
TCM_004777
Theobroma cacao
TCM_004777
I
0.758
TCM_021318
Theobroma cacao
TCM_021318
I
0.757
PK16958.1
Cannabis sativa
PK16958.1
I
0.757
Cla009418
Citrullus lanatus
Cla009418
I
0.755
Cla022107
Citrullus lanatus
Cla022107
I
0.752
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.752
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.751
Pm008294
Prunus mume
Pm008294
I
0.751
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.748
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.748
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.746
Bra037419
Brassica rapa
Bra037419
I
0.746
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.746
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.746
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.745
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.745
Ciclev10023756m.g
Citrus clementina
Ciclev10023756m.g
I
0.741
orange1.1g046093m.g
Citrus sinensis
orange1.1g046093m.g
I
0.741
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.740
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.740
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.739
Bra036145
Brassica rapa
Bra036145
I
0.737
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.736
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.733
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.733
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.731
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.728
Si002107m.g
Setaria italica
Si002107m.g
I
0.728
mgf003233m
Mimulus guttatus
mgf003233m
I
0.727
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.727
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.726
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.726
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.725
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.725
Si039538m.g
Setaria italica
Si039538m.g
I
0.725
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.725
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.724
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.724
MYB12
Arabidopsis thaliana
AT2G47460
I
0.722
MYB111
Arabidopsis thaliana
AT5G49330
D
0.722
Bra000453
Brassica rapa
Bra000453
I
0.722
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.722
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.722
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.722
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.722
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.722
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.719
PK06182.1
Cannabis sativa
PK06182.1
D
0.719
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.718
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.717
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.715
TCM_021317
Theobroma cacao
TCM_021317
I
0.715
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.715
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.714
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.713
F775_11235
Aegilops tauschii
F775_11235
I
0.713
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.713
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.713
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.713
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.713
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.713
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.713
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.712
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.711
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.711
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.708
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.708
OBART03G14380
Oryza barthii
OBART03G14380
I
0.708
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.708
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.708
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.708
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.707
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.706
TCM_037555
Theobroma cacao
TCM_037555
I
0.705
Aquca_028_00141
Aquilegia coerulea
Aquca_028_00141
I
0.705
GRMZM2G160838
Zea mays
GRMZM2G160838
I
0.702
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.700
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.699
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.699
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.697
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.697
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.696
SELMODRAFT_120788
Selaginella moellendorffii
SELMODRAFT_120788
I
0.696
SELMODRAFT_450007
Selaginella moellendorffii
SELMODRAFT_450007
I
0.696
mgf012733m
Mimulus guttatus
mgf012733m
I
0.695
Pavir.Ca00231
Panicum virgatum
Pavir.Ca00231
I
0.695
Pavir.J00444
Panicum virgatum
Pavir.J00444
I
0.695
Pm020104
Prunus mume
Pm020104
I
0.692
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.691
GSMUA_Achr11G07180_001
Musa acuminata
GSMUA_Achr11G07180_001
I
0.690
30068.m002544
Ricinus communis
30068.m002544
I
0.689
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.689
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.689
TCM_000174
Theobroma cacao
TCM_000174
I
0.685
F775_18434
Aegilops tauschii
F775_18434
I
0.683
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.679
Pm005571
Prunus mume
Pm005571
I
0.678
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
0.677
OB03G24320
Oryza brachyantha
OB03G24320
I
0.677
Sb08g004720
Sorghum bicolor
Sb08g004720
I
0.677
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.677
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.677
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.676
PGSC0003DMG401023433
Solanum tuberosum
PGSC0003DMG401023433
I
0.675
PRUPE_ppa010716mg
Prunus persica
PRUPE_ppa010716mg
I
0.675
Pm014372
Prunus mume
Pm014372
I
0.675
Gorai.009G263200
Gossypium raimondii
Gorai.009G263200
I
0.675
Cla016084
Citrullus lanatus
Cla016084
I
0.673
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.673
Cucsa.370600
Cucumis sativus
Cucsa.370600
I
0.673
POPTR_0001s11100
Populus trichocarpa
POPTR_0001s11100
I
0.672
POPTR_0003s14420
Populus trichocarpa
POPTR_0003s14420
I
0.672
cassava34176.m1
Manihot esculenta
cassava34176.m1
I
0.672
SapurV1A.0035s0030
Salix purpurea
SapurV1A.0035s0030
I
0.672
SapurV1A.0059s0150
Salix purpurea
SapurV1A.0059s0150
I
0.672
Cucsa.096800
Cucumis sativus
Cucsa.096800
I
0.671
MYB11
Arabidopsis thaliana
AT3G62610
I
0.670
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.669
MYB4
Arabidopsis thaliana
AT4G38620
D
0.669
GSMUA_AchrUn_randomG28780_001
Musa acuminata
GSMUA_AchrUn_randomG28780_001
I
0.669
MTR_8g027345
Medicago truncatula
MTR_8g027345
I
0.669
POPTR_0004s14510
Populus trichocarpa
POPTR_0004s14510
I
0.669
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.669
Pm025102
Prunus mume
Pm025102
I
0.669
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.669
Lus10010273.g
Linum usitatissimum
Lus10010273.g
I
0.669
Pavir.J30990
Panicum virgatum
Pavir.J30990
I
0.669
GRMZM2G041415
Zea mays
GRMZM2G041415
I
0.668
GSMUA_Achr8G32480_001
Musa acuminata
GSMUA_Achr8G32480_001
I
0.667
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.667
Bo3g044210
Brassica oleracea
Bo3g044210
I
0.666
Bo7g119670
Brassica oleracea
Bo7g119670
I
0.666
Bra000680
Brassica rapa
Bra000680
I
0.666
Bra010736
Brassica rapa
Bra010736
I
0.666
Bra033572
Brassica rapa
Bra033572
I
0.666
ATMYB4
Arabidopsis lyrata
fgenesh2_kg.7__59__AT4G38620.1
I
0.666
GSMUA_Achr2G20600_001
Musa acuminata
GSMUA_Achr2G20600_001
I
0.666
Solyc10g055410.1
Solanum lycopersicum
Solyc10g055410.1
I
0.666
Cla020592
Citrullus lanatus
Cla020592
I
0.666
Cucsa.234310
Cucumis sativus
Cucsa.234310
I
0.666
Bostr.25542s0045
Boechera stricta
Bostr.25542s0045
I
0.666
Eucgr.I01406
Eucalyptus grandis
Eucgr.I01406
I
0.666
SapurV1A.0591s0010
Salix purpurea
SapurV1A.0591s0010
I
0.666
SapurV1A.1127s0040
Salix purpurea
SapurV1A.1127s0040
I
0.666
Thhalv10025886m.g
Eutrema salsugineum
Thhalv10025886m.g
I
0.666
Gorai.007G192900
Gossypium raimondii
Gorai.007G192900
I
0.664
PGSC0003DMG400031317
Solanum tuberosum
PGSC0003DMG400031317
I
0.663
PRUPE_ppa017039mg
Prunus persica
PRUPE_ppa017039mg
I
0.663
Solyc06g065100.2
Solanum lycopersicum
Solyc06g065100.2
I
0.663
Pm019588
Prunus mume
Pm019588
I
0.663
GSMUA_Achr6G12930_001
Musa acuminata
GSMUA_Achr6G12930_001
I
0.662
cassava24925.valid.m1
Manihot esculenta
cassava24925.valid.m1
I
0.662
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.662
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
0.662
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.662
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.662
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.662
GSMUA_Achr2G02970_001
Musa acuminata
GSMUA_Achr2G02970_001
I
0.661
TCM_010778
Theobroma cacao
TCM_010778
I
0.661