CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1467521g002
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1467521g002
T291146_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG
CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.881
0.957
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.760
0.870
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.756
0.870
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR
YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.756
0.870
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.756
0.870
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.756
0.870
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00
Ostreococcus tauri
NRMCCTANN
NNTAGGKYN
PBM
Weirauch et al.(2014)
pTH9424
0.723
0.696
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.673
0.739
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.673
0.739
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN
NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.672
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1467521g002
Myb
21
72
KQKWTAEEEAALKAGVVKHGAGKWRTILKDPEFSGILCLRSNVDLKDKWRNI
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
229 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
0.909
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
0.909
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
0.902
29812.m000204
Ricinus communis
29812.m000204
I
0.902
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
0.902
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
0.902
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
0.902
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
0.902
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
0.896
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
0.890
Pm021139
Prunus mume
Pm021139
I
0.890
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
0.890
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
0.882
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
0.881
Pm002374
Prunus mume
Pm002374
I
0.881
MDP0000239354
Malus domestica
MDP0000239354
I
0.881
PK06103.1
Cannabis sativa
PK06103.1
D
0.881
SELMODRAFT_443975
Selaginella moellendorffii
SELMODRAFT_443975
I
0.872
SELMODRAFT_49312
Selaginella moellendorffii
SELMODRAFT_49312
I
0.872
GLYMA01G40220
Glycine max
GLYMA01G40220
I
0.869
GLYMA05G22500
Glycine max
GLYMA05G22500
I
0.869
GLYMA11G05070
Glycine max
GLYMA11G05070
I
0.869
GLYMA17G17370
Glycine max
GLYMA17G17370
I
0.869
MTR_4g097130
Medicago truncatula
MTR_4g097130
I
0.869
Ca_02232
Cicer arietinum
Ca_02232
I
0.869
Ca_09355
Cicer arietinum
Ca_09355
I
0.869
Cla014248
Citrullus lanatus
Cla014248
I
0.869
Cucsa.103240
Cucumis sativus
Cucsa.103240
I
0.869
LjT25P15.150.nd
Lotus japonicus
LjT25P15.150.nd
I
0.869
TCM_007242
Theobroma cacao
TCM_007242
I
0.868
TRB1
Vitis vinifera
VIT_03s0091g01030
I
0.868
Cla006547
Citrullus lanatus
Cla006547
I
0.868
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
0.868
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
0.868
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
0.868
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
0.868
PK19870.1
Cannabis sativa
PK19870.1
I
0.868
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
0.863
Eucgr.H02312
Eucalyptus grandis
Eucgr.H02312
I
0.860
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
0.857
BRADI4G01770
Brachypodium distachyon
BRADI4G01770
I
0.849
MLOC_10278
Hordeum vulgare
MLOC_10278
I
0.849
Traes_5AS_8756ECB5A
Triticum aestivum
Traes_5AS_8756ECB5A
I
0.849
Traes_5BS_EB206B8BC
Triticum aestivum
Traes_5BS_EB206B8BC
I
0.849
Traes_5DS_3EE830A43
Triticum aestivum
Traes_5DS_3EE830A43
I
0.849
TRIUR3_10613
Triticum urartu
TRIUR3_10613
I
0.849
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
0.839
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
0.839
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
0.837
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
0.836
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
0.830
MDP0000234807
Malus domestica
MDP0000234807
I
0.828
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
0.822
GSMUA_Achr4G08670_001
Musa acuminata
GSMUA_Achr4G08670_001
I
0.815
GSMUA_Achr4G09130_001
Musa acuminata
GSMUA_Achr4G09130_001
I
0.815
GSMUA_Achr8G24960_001
Musa acuminata
GSMUA_Achr8G24960_001
I
0.815
gene07496-v1.0-hybrid
Fragaria vesca
gene07496-v1.0-hybrid
I
0.807
chr3.LjT02L14.30.nd
Lotus japonicus
chr3.LjT02L14.30.nd
I
0.792
LjSGA_016825.2
Lotus japonicus
LjSGA_016825.2
I
0.792
BGIOSGA035841
Oryza indica
BGIOSGA035841
I
0.791
OB12G25520
Oryza brachyantha
OB12G25520
I
0.791
OBART12G18680
Oryza barthii
OBART12G18680
I
0.791
OGLUM12G20330
Oryza glumaepatula
OGLUM12G20330
I
0.791
OLONG_008332
Oryza longistaminata
OLONG_008332
I
0.791
ONIVA12G17630
Oryza nivara
ONIVA12G17630
I
0.791
OPUNC12G16890
Oryza punctata
OPUNC12G16890
I
0.791
ORGLA12G0159400
Oryza glaberrima
ORGLA12G0159400
I
0.791
ORUFI12G20880
Oryza rufipogon
ORUFI12G20880
I
0.791
OS12G0613300
Oryza sativa
OS12G0613300
I
0.791
29661.m000926
Ricinus communis
29661.m000926
I
0.791
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
0.791
Aquca_060_00026
Aquilegia coerulea
Aquca_060_00026
I
0.785
chr2.LjT13P17.300.nd
Lotus japonicus
chr2.LjT13P17.300.nd
I
0.784
LjSGA_029815.1
Lotus japonicus
LjSGA_029815.1
I
0.784
PDK_20s1888511g002
Phoenix dactylifera
PDK_20s1888511g002
I
0.781
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
0.780
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
0.780
TCM_000807
Theobroma cacao
TCM_000807
I
0.780
Ciclev10026089m.g
Citrus clementina
Ciclev10026089m.g
I
0.780
Gorai.003G030800
Gossypium raimondii
Gorai.003G030800
I
0.780
Gorai.007G224200
Gossypium raimondii
Gorai.007G224200
I
0.780
orange1.1g020653m.g
Citrus sinensis
orange1.1g020653m.g
I
0.780
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
0.778
GLYMA09G03390
Glycine max
GLYMA09G03390
I
0.774
GLYMA15G14320
Glycine max
GLYMA15G14320
I
0.774
OMERI12G14000
Oryza meridionalis
OMERI12G14000
I
0.770
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
0.767
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
0.766
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
0.766
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
0.766
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
0.766
EuGene.0500010080
Micromonas sp RCC299
EuGene.0500010080
I
0.762
Thhalv10018950m.g
Eutrema salsugineum
Thhalv10018950m.g
I
0.762
BRADI2G47820
Brachypodium distachyon
BRADI2G47820
I
0.761
GRMZM2G108424
Zea mays
GRMZM2G108424
I
0.761
LPERR01G24270
Leersia perrieri
LPERR01G24270
I
0.761
Sb03g032530
Sorghum bicolor
Sb03g032530
I
0.761
Si002467m.g
Setaria italica
Si002467m.g
I
0.761
Traes_3AL_12B53AB09
Triticum aestivum
Traes_3AL_12B53AB09
I
0.761
TRAES3BF075800120CFD_g
Triticum aestivum
TRAES3BF075800120CFD_g
I
0.761
Pavir.Ea02570
Panicum virgatum
Pavir.Ea02570
I
0.761
Pavir.Eb02802
Panicum virgatum
Pavir.Eb02802
I
0.761
TRB1
Arabidopsis thaliana
AT1G49950
D
0.760
Bo6g018740
Brassica oleracea
Bo6g018740
I
0.760
Bra018818
Brassica rapa
Bra018818
I
0.760
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
0.760
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
0.760
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
0.760
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
0.760
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
0.760
Ca_08043
Cicer arietinum
Ca_08043
I
0.758
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
0.757
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
0.757
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
0.757
TRB2
Arabidopsis thaliana
AT5G67580
D
0.756
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
0.756
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
0.753
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
0.753
OBART01G21150
Oryza barthii
OBART01G21150
I
0.753
OLONG_011068
Oryza longistaminata
OLONG_011068
I
0.753
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
0.753
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
0.753
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
0.753
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
0.753
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
0.753
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
0.753
OS01G0589300
Oryza sativa
OS01G0589300
I
0.753
MTR_2g099610
Medicago truncatula
MTR_2g099610
I
0.752
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
0.752
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
0.752
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
0.752
Bo1g081300
Brassica oleracea
Bo1g081300
I
0.748
Bra029978
Brassica rapa
Bra029978
I
0.748
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
0.748
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
0.748
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
0.748
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
0.748
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
0.748
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
0.746
Ca_02722
Cicer arietinum
Ca_02722
I
0.744
Thhalv10012087m.g
Eutrema salsugineum
Thhalv10012087m.g
I
0.741
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
0.740
Solyc07g040920.2
Solanum lycopersicum
Solyc07g040920.2
I
0.740
mgf009594m
Mimulus guttatus
mgf009594m
I
0.739
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
0.737
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
0.737
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
0.737
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
0.736
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
0.736
Eucgr.J02841
Eucalyptus grandis
Eucgr.J02841
I
0.736
Lus10011546.g
Linum usitatissimum
Lus10011546.g
I
0.734
Lus10019260.g
Linum usitatissimum
Lus10019260.g
I
0.734
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
0.733
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
0.733
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
0.733
Bo3g096520
Brassica oleracea
Bo3g096520
I
0.727
Bo9g019040
Brassica oleracea
Bo9g019040
I
0.727
Bra024438
Brassica rapa
Bra024438
I
0.727
Bra037837
Brassica rapa
Bra037837
I
0.727
Bra037839
Brassica rapa
Bra037839
I
0.727
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
0.723
estExt_fgenesh1_pg.C_Chr_13.00010057
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_13.00010057
D
0.723
GRMZM2G023667
Zea mays
GRMZM2G023667
I
0.722
OB01G30760
Oryza brachyantha
OB01G30760
I
0.719
evm.TU.supercontig_25.81
Carica papaya
evm.TU.supercontig_25.81
I
0.716
Bo5g077530
Brassica oleracea
Bo5g077530
I
0.715
Bra039650
Brassica rapa
Bra039650
I
0.715
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
0.713
29912.m005376
Ricinus communis
29912.m005376
I
0.713
Aquca_001_00028
Aquilegia coerulea
Aquca_001_00028
I
0.713
mgf000125m
Mimulus guttatus
mgf000125m
I
0.712
mgf010975m
Mimulus guttatus
mgf010975m
I
0.712
TRB3
Arabidopsis thaliana
AT3G49850
I
0.709
Ciclev10009173m.g
Citrus clementina
Ciclev10009173m.g
I
0.705
orange1.1g024128m.g
Citrus sinensis
orange1.1g024128m.g
I
0.705
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
0.699
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
0.699
Solyc01g106940.2
Solanum lycopersicum
Solyc01g106940.2
I
0.697
mgf004823m
Mimulus guttatus
mgf004823m
I
0.696
AT1G17520
Arabidopsis thaliana
AT1G17520
I
0.695
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
0.695
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
0.695
Ca_10058
Cicer arietinum
Ca_10058
I
0.689
Lus10012092.g
Linum usitatissimum
Lus10012092.g
I
0.688
Lus10025203.g
Linum usitatissimum
Lus10025203.g
I
0.688
mgf011386m
Mimulus guttatus
mgf011386m
I
0.687
Lus10027621.g
Linum usitatissimum
Lus10027621.g
I
0.683
EuGene.0000030935
Micromonas pusilla
EuGene.0000030935
I
0.681
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
0.681
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
0.680
Si002403m.g
Setaria italica
Si002403m.g
I
0.680
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
0.680
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
0.680
VIT_11s0016g01890
Vitis vinifera
VIT_11s0016g01890
I
0.679
gene12682-v1.0-hybrid
Fragaria vesca
gene12682-v1.0-hybrid
I
0.679
EuGene.1300010252
Ostreococcus RCC809
EuGene.1300010252
I
0.675
AT1G72740
Arabidopsis thaliana
AT1G72740
D
0.673
MTR_8g092810
Medicago truncatula
MTR_8g092810
I
0.673
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
0.672
Bo5g023860
Brassica oleracea
Bo5g023860
I
0.672
Bra025967
Brassica rapa
Bra025967
I
0.672
OB01G37330
Oryza brachyantha
OB01G37330
I
0.672
OBART01G28260
Oryza barthii
OBART01G28260
I
0.672
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
0.672
OLONG_008666
Oryza longistaminata
OLONG_008666
I
0.672
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
0.672
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
0.672
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
0.672
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
0.672
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
0.672
OS01G0708000
Oryza sativa
OS01G0708000
D
0.672
PK00568.1
Cannabis sativa
PK00568.1
I
0.671
GRMZM2G087817
Zea mays
GRMZM2G087817
I
0.670
GRMZM2G136887
Zea mays
GRMZM2G136887
I
0.670
Sb03g026470
Sorghum bicolor
Sb03g026470
I
0.670
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
0.670
TRAES3BF118300070CFD_g
Triticum aestivum
TRAES3BF118300070CFD_g
I
0.670
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
0.670
Lus10030935.g
Linum usitatissimum
Lus10030935.g
I
0.670
Lus10040111.g
Linum usitatissimum
Lus10040111.g
I
0.670
mgf007122m
Mimulus guttatus
mgf007122m
I
0.665
Thhalv10011866m.g
Eutrema salsugineum
Thhalv10011866m.g
I
0.665
Bo7g099090
Brassica oleracea
Bo7g099090
I
0.664
Bra012919
Brassica rapa
Bra012919
I
0.664
cassava43824.valid.m1
Manihot esculenta
cassava43824.valid.m1
I
0.664
TCM_029078
Theobroma cacao
TCM_029078
I
0.663
29706.m001328
Ricinus communis
29706.m001328
I
0.663
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
0.663
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
0.663